Oncorhynchus tshawytscha (Chinook salmon): 121840796
Help
Entry
121840796 CDS
T05605
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
121840796
04121 Ubiquitin system [BR:
otw04121
]
121840796
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
121840796
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121840796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Motif
Other DBs
NCBI-GeneID:
121840796
NCBI-ProteinID:
XP_042162063
UniProt:
A0A8C8CAC5
LinkDB
All DBs
Position
LG25:complement(22570212..22572558)
Genome browser
AA seq
599 aa
AA seq
DB search
MSKRSVVWQHFIVVMDDAKKVECKLCKQRFAYHSSTTNMTYHLKTAHPQYSTSASTASSG
LTQTTLDQNSPISEKREREITDGIVDFIALDMRPVNLIEGVGFKDMMKILEPGYTVPKRE
TVMHALTAKYETTKEKVLESIKNSQAVSFTTDMWTSLRMESYMTVTAHFITEAWGLQCLV
LETKQMEENHTAATIAQRLGEVADKYEIPGCKRVAVVHDNAANMILCADILGRDEKWAGV
KGIRCAGHTLQLCINATLNQDPICRTVVAARLLVAHFKKRTKARKGLKEKQKEQKVVEHV
LIQDVSMRWNSSQTMLARLIEQRWPVTAVLSDPNYTGENERNLDLTPAQWNMAEDISNVL
KPIVTLTELQSEEENASLSATIPMLANLKRRHLAPVEDDSPTTKSLKTRLVEESDNRWQL
KDRLFESSIYVQAAVVDPRFKLLSFLDDAKRDVAYINVSQLADRLSAEGDRDSSTPTDEE
VPAPKRKKTDKEREIDMLMCGDEGEKEFPGDSKKEVKYYLQDRTKVDAGPLAWWGKNEDR
YPRLARAAKYLLSIPATSTPSERIFSKAGFIFNKTRSCLLPENVDKLVFLSHNLKRLGK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaggtctgtagtatggcagcatttcattgtagtaatggatgacgccaaaaaa
gtggaatgcaaactctgcaaacagcggtttgcttaccatagttcgacaacgaatatgaca
tatcacttgaaaacagcgcatccccagtacagcacgagcgcctccactgctagctcaggt
ttaacccaaaccaccttggaccagaattccccaatctcagaaaaaagagagagagagata
acggatggtatcgtggacttcattgccttggacatgaggcccgttaacctgatagagggc
gtgggatttaaggatatgatgaaaatcttggagcctggttacactgttcccaagagagag
actgttatgcatgctctgacagcgaaatatgagaccacaaaagagaaggttttggagtct
atcaaaaacagccaggcagtaagttttacaaccgacatgtggacctcactgaggatggag
tcatacatgaccgtaactgcccatttcattacggaggcctggggactgcagtgtcttgtg
ctggagacaaagcaaatggaggagaatcacaccgccgccaccattgcgcagagacttgga
gaagtggccgacaaatacgaaatcccaggatgtaaaagggtcgctgtggtacacgacaac
gccgcaaatatgattttgtgtgcagatatactggggcgggatgagaaatgggcaggcgtt
aaaggaatcagatgtgctggacacaccttacagctgtgcatcaacgccactctcaatcaa
gaccccatctgtcgcactgtggttgcagccagactccttgtggctcattttaagaagcga
acaaaagccagaaagggactaaaggagaagcaaaaagaacaaaaggtggttgaacatgtc
ctgatccaagacgtttccatgcggtggaattcttctcagaccatgttagcccgtctgata
gaacagagatggcctgtaacagcagtgctctccgaccccaactacactggggaaaatgaa
cgcaaccttgatctcaccccagcgcaatggaacatggcagaggacatttcaaatgtgctg
aagcccattgtcaccctgactgagctgcagtccgaggaggaaaatgcatccttatctgca
accatacccatgctggccaacctcaaacgtcgtcacttggcaccagtggaggacgacagc
cccaccactaagagtcttaaaacaaggctggtggaggaatctgacaacagatggcagctc
aaagaccgactatttgagagtagtatatacgtccaagcagcagtcgtagacccccgcttc
aagctgctttcgttccttgacgatgcaaaacgggacgtagcctacatcaacgtgtcccaa
ctggccgaccggttgagcgctgagggagaccgagacagctctacacccactgatgaagag
gtacccgcaccaaaaagaaaaaaaacagataaggagcgggagattgatatgctaatgtgt
ggagatgagggagagaaagagtttccgggggatagcaaaaaagaagttaagtattatctc
caagatagaacgaaagtcgacgctggaccactagcttggtgggggaaaaatgaggacagg
tatccgaggctggccagagcagcgaaatacctcctctcgattccggcgacctctactcca
tcagaacggatattttccaaggcagggtttatattcaataaaacgaggagctgccttctg
cccgaaaatgttgacaagctggtgttcctgtcgcataacttgaaaagattggggaagtag
DBGET
integrated database retrieval system
