Oncorhynchus tshawytscha (Chinook salmon): 121841035
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Entry
121841035 CDS
T05605
Name
(RefSeq) MAGUK p55 subfamily member 4 isoform X1
KO
K21109
MAGUK p55 subfamily member 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121841035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
121841035
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
PDZ domain-containing proteins
MAGUK family proteins
121841035
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27
PDZ
PDZ_6
SH3_1
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121841035
NCBI-ProteinID:
XP_042162897
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Position
LG26:complement(51952989..52029619)
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AA seq
609 aa
AA seq
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MLSSVAEEVRLAIHSDISGSEVLYSLLSAPWLQSLLKIYECLQKFRRLPPSPYLPYASGL
SHEILSNIRAVPAPSPEARQLYSLLKSPHLQALLSAHDMVAQTDYEPVLPPLPEDLPEDE
EAMRIVCLVKNKQPLGATIKRDEETGEIFIARVIHGGLADRSGLLHPGDLLVEVNGNPVE
GLDPEQVIQILVQSQGTILFKVIPNTPQSTKTQKPALLYVRAMADYCPLQDPAIPCPDAG
MVFSRGDLLEIVDQTDIHWWQARKLPSASACAGLIPSTSLLKSKQRETWWSQPFQAHTCI
KPLSIAGDEDDVKTNSGNGAIADEEDFESEDLREVYPEEAEEGAHTMGGIYISGFRRSFR
LWRRMTHRTRRQSCYSCSPNTSALSSPYEEVVSYQRRPDDPHRLIILVGPSGVGVNELRK
RLIKLNPHTFQGAVPHTTRPARDGEGTGKEYNFVTKELFDYMVCNHRFLEYGEYKGHLYG
TSIDAVKDVIDSGRMCVIDTEPHSILSVRNKTFKPYVIFIKPPSSERLRQTRRDARIITS
CVVNRPFKDVDFEEMEDAARFMEGKYGQYFDRVIVNEELQDACMKLFNDIQLAQEGPHWI
PAAWLSTED
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccagtgtggcagaggaggtgaggctggctatccacagtgacatcagtgggtct
gaagtcctctacagccttctcagtgccccctggctacagtccctactcaagatctacgag
tgtctgcagaagttcagaaggcttccacccagtccctacctgccctatgcctctggtctc
tctcatgagatcctgtccaacatcagagcagtaccagctccgtccccagaggccagacag
ctctatagtctactgaagtccccccatctacaggccctcctctcagcccatgacatggtg
gcccagacggactatgagccagttctccctccgctccctgaggacctgccggaagacgag
gaggccatgaggatcgtctgtctggtcaagaacaaacagcctctgggagccacaataaag
agggacgaggaaacaggagagatattcatagcccgggtgatacacggaggccttgcagat
cgcagtggtcttctgcatccaggggatctgctggtggaggtgaatgggaaccctgtagaa
ggactggacccagaacaggtcatacagatactggtccaatctcaaggcactattttgttc
aaagtgattccaaacacaccacaatcaactaagacccaaaagccagccttgctgtatgtg
cgggccatggcagactactgccccctgcaggacccagcgatcccctgtcctgacgctggc
atggtcttcagtagaggagacctgctggagatagtcgaccagacagacatccactggtgg
caggctaggaagcttcccagtgcctcagcctgcgccggcctcatcccctccaccagtctg
ctcaagagcaaacagagggagacgtggtggtcacagcctttccaggcccacacctgcatc
aaacccttgagcatagctggtgatgaggacgacgttaagaccaacagtgggaatggtgcc
atagcagatgaagaagattttgaatctgaggacctcagagaagtgtatcccgaagaggct
gaagaaggagcacatacgatgggtggcatctacatctcgggattccgccgtagtttccgt
ctgtggcggagaatgacccaccgtacgcgtcgccaatcctgctactcctgttctcccaac
acctcggctctgtccagcccctatgaagaggtggtcagctaccagagacgacctgacgac
ccgcacagactgatcatcctcgtaggtccttctggtgtaggggtgaatgaactcaggaaa
agactgatcaaactcaacccacacaccttccagggagctgtgcctcacacaacgcgacca
gccagagatggagaggggacaggaaaagaatataactttgtcaccaaagagctgtttgat
tacatggtgtgcaaccacaggttcctggagtacggtgaatataaaggtcatctatatggg
accagtattgatgctgtcaaagacgtgatagacagtggaaggatgtgtgttatagacact
gagccacatagcatcctgtccgtgaggaataagacgttcaagccttatgtcatctttata
aagcctcccagttcagaacgactgagacagacacggagggatgcacgcatcatcaccagc
tgtgttgtcaacagaccttttaaagatgttgactttgaggagatggaggatgctgccagg
ttcatggaggggaagtacggtcagtacttcgaccgcgtcatagtcaacgaggagctgcag
gatgcctgtatgaagctgttcaatgacatacagctggctcaggagggaccacattggata
cctgccgcatggctcagtactgaggactag
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