Oncorhynchus tshawytscha (Chinook salmon): 121841056
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Entry
121841056 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: interferon omega-1-like
KO
K05414
interferon alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04217
Necroptosis
otw04620
Toll-like receptor signaling pathway
otw04621
NOD-like receptor signaling pathway
otw04622
RIG-I-like receptor signaling pathway
otw04623
Cytosolic DNA-sensing pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121841056
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121841056
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121841056
04621 NOD-like receptor signaling pathway
121841056
04622 RIG-I-like receptor signaling pathway
121841056
04623 Cytosolic DNA-sensing pathway
121841056
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121841056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
121841056
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Interferons
121841056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF6940
Motif
Other DBs
NCBI-GeneID:
121841056
NCBI-ProteinID:
XP_042163029
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All DBs
Position
LG27:complement(4099973..4111154)
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AA seq
173 aa
AA seq
DB search
MGLKTGGEHSACAWEITRVEVRDNLVQFKKFLDSSQALRKKRKVERIFPEHVIKNTQGED
VSVVALESLEYMAQLFNSLTPVTWNKETLNLFKNRXPSXVKKLEGCVGCGVGASSGDGGS
VTSGKGSLKTYFNKLNTILIQKEHSACAWEITRVEVRDNLVQFKKFLDSRVKP
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggggctcaaaacaggtggggaacatagcgcatgcgcatgggagatcacacgagtggag
gttcgcgacaacctggtgcagttcaagaaattcctcgacagcagtcaagccttgaggaag
aagagaaaagtcgagcgcatatttccagagcatgttatcaagaacacacagggggaggac
gtctctgtggttgcattagagtctttggagtatatggcccaattatttaacagcctgact
cctgtcacatggaacaaagaaacactgaacctgttcaaaaacagatgacctagttaagtt
aagaaattggagggatgcgtcgggtgtggtgttggggcatcctctggagatggagggtca
gtgacttcaggcaaagggtctctgaaaacgtatttcaacaagctaaacacaatcttgata
cagaaggaacatagcgcatgcgcatgggagatcacgcgagtggaggttcgcgacaacctg
gtgcagttcaagaaattcctcgacagcagagtcaagccatga
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