Oncorhynchus tshawytscha (Chinook salmon): 121841306
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Entry
121841306 CDS
T05605
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otw03009
]
121841306 (nop2)
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
121841306 (nop2)
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121841306 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
121841306
NCBI-ProteinID:
XP_042164466
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Position
LG03:6355283..6362121
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AA seq
744 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKESIEKEEPKKGFTDENSEWLKPAKRKREVGQSDNEDDSDSQWEQEEDEGQEGGENNKG
KKILIEGDGDDDDLVDDYGALEDSSEGEGEVDGDGEELLPIERAARKQKKLQEAMGQESD
DDDDDNKGKSGDEDMDEDDTVQANLDDMDKFILPGAEEIAKEGVLLVDLQTIHQRIKDNV
DVLSHFATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEANEIQ
RPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAGHYM
LQGASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKSVVG
NIHRLGVTNSMICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDIQRL
AHLQKELILAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLDFG
KEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGEEETEPS
DAVEVTADSSDEDGPSKAGSKNKSKKQKPVPCKPTVSQKATANGKPAKSIAKKTTNPSTL
KKNEKPTGPKKTKIAKMDGGTVKVDGELKKSKTEGETTKQSKEGSRFEKKGDKQRKSPTQ
SKKRMGKNKFNKLKKLLKKEEVGQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaagtgaccaaaaag
cccaaggaaagcattgagaaggaggagccaaaaaaaggattcacagatgaaaacagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggccaatcagataatgaggatgacagt
gacagccaatgggagcaggaagaggacgagggacaagagggaggggagaacaataaaggg
aaaaaaattctaattgagggagatggtgatgatgatgacctggttgatgactatggtgca
ttggaggacagcagtgaaggagagggggaagtagacggtgatggagaggagctgctcccc
atcgagcgagctgccaggaagcagaagaagctgcaggaagcaatgggccaggagagtgat
gatgatgatgatgataataaggggaagagtggagatgaagacatggatgaagatgacacg
gtacaggctaatttagatgatatggacaaattcatactacctggagcagaggagatagca
aaagagggtgttttgcttgtagacctgcagaccatccaccagagaataaaggacaacgtg
gatgttctctctcactttgcaaccaagagagaggaggggaaagagagaacagagtacctc
tctctcctcaaaaaggatctttccacttactacagctacaacaatttcctcatagacaaa
ctgctggatatcttcccagtgtcagagctgattgatttcctggaggccaatgaaattcag
cgacctgtcaccattcggaccaatacactgaagacaaggaggagggacttggctcaggcc
ctgatcaacagaggggtgaatctggatcctctggggaagtggtctaaagtgggcctggtc
attttcgactcctcggtacccataggtgcgaccccagagtacctagctggtcactacatg
ctgcagggagcctccagcttcctgcctgtcatggctctctctccccaggagggggagact
gtgctcgacatgagctcagctcccgggggaaagaccacctatatggcccagttgatgagg
aacacaggtgtgattgtggccaatgatgccagtgctgacagactgaagagtgtggtgggc
aacatccaccgtctgggagtcaccaactcaatgatctgtaactacgacgggaggcagttc
cctaaggtaatgggggggtttgacagagtgctgcttgatgctccctgctcaggcacagga
gtaatctccaaagaccctgctgtgaagaccagtaaagacgagtctgacatccagcggttg
gcccacctgcagaaggagctcatcctggcggccatcgactcggtcaacgctgagtctccc
tctggaggctatctggtgtactgcacatgctctataatggtggaggagaacgagtgggta
gtggactatgctctcaagaaaagaaacgtcaaactcgtccagactggactggactttggc
aaagaaggtttcaccagattcaaagagagacgattccatccctctctgaaactctcacgc
cggttctatcctcattcccacaacatggacggtttctttgtggccaagctgaaaaagttc
tccaacacggtcccaaccacagcagttgacaaagacggagaagaggaaaccgagccatct
gacgcagtagaggttacagctgattcctctgatgaggacgggccatctaaagcagggtct
aagaacaagtccaagaagcagaagccagtcccttgcaagccaactgtgtcacagaaggcc
acagccaacgggaagccagccaaaagcatcgccaagaaaacaacaaacccaagcaccttg
aaaaagaatgagaaaccaactgggccgaaaaagacaaagatcgctaagatggatggtggg
actgtgaaagtggatggcgagctcaagaagtccaaaacagaaggggaaacgaccaaacag
tcaaaggaagggagcaggtttgagaaaaagggcgataaacagaggaaatcccccacgcag
agcaagaagagaatggggaagaacaaattcaataagttgaagaagctgctgaaaaaagaa
gaggttggacaatga
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