KEGG   Oncorhynchus tshawytscha (Chinook salmon): 121841353
Entry
121841353         CDS       T05605                                 
Name
(RefSeq) polyubiquitin-B-like
  KO
K08770  ubiquitin B/C
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320  PPAR signaling pathway
otw04120  Ubiquitin mediated proteolysis
otw04137  Mitophagy - animal
otw04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121841353
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121841353
   04137 Mitophagy - animal
    121841353
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    121841353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    121841353
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    121841353
Ubiquitin system [BR:otw04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   121841353
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   121841353
  Exosomal proteins of other body fluids (saliva and urine)
   121841353
  Exosomal proteins of colorectal cancer cells
   121841353
  Exosomal proteins of bladder cancer cells
   121841353
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 121841353
NCBI-ProteinID: XP_042164914
LinkDB
Position
LG30:22880246..22882309
AA seq 381 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGQ
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtcaagaccctcactggtaaaaccatcacactagaagtggagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgctggcaagcagctggaagatggccgtaccctctccgactacaac
atccagaaagagtccaccctccaccttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgctggcaagcagctggaagatggccgtaccctctctgactacaacatccagaaagag
tccaccctccaccttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggtaaaaccatcacactagaagtggagcccagtgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatcttcgctggcaag
cagctggaagatggccgtaccctctccgactacaacatccagaaagagtccaccctccac
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaacc
atcacactagaagtggagcccagtgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgctggcaagcagctggaagat
ggccgtaccctctctgactacaacatccagaaagagtccaccctccaccttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaaccatcacactagaa
gtggagcccagtgacaccattgagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagcgtctgatcttcgctggcaagcagctggaagatggccgtaccctc
tccgactacaacatccagaaagagtccacactccaccttgtgctgcgtctcaggggagga
cagtaa

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