Oncorhynchus tshawytscha (Chinook salmon): 121841385
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Entry
121841385 CDS
T05605
Name
(RefSeq) basal cell adhesion molecule-like isoform X1
KO
K06578
Lutheran blood group glycoprotein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
otw04090
]
121841385
CD molecules [BR:
otw04090
]
Proteins
121841385
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
C2-set_3
C1-set
Orf78
DUF3377
Psg1
S1FA
Motif
Other DBs
NCBI-GeneID:
121841385
NCBI-ProteinID:
XP_042165164
UniProt:
A0AAZ3S649
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Position
LG03:complement(8273872..8392132)
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AA seq
618 aa
AA seq
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MDGMVTFGRASLLCTLLLCFSLQVCWAIVTVTVTPKVEVIKGESASLPCTFIIPNSPNNI
VEWFIEEGGTRKRVAFRSVSGGEGKSDEGTRLSDRVTMGRDFSLTISPVTVEDQLPFYCQ
VTAGPAGVGEAITQLKVFFAPEMPEVTGSNQAISVGDSSTQVGQCVSHNGHPQPRIIWFQ
DSKPLPEVKDNKEKVYMVPSVVKEASGLFTITSTLMMQPQKADKDSVYHCTVEYSMPNDM
IKQIDSDTFSLTLNYPSETATFVLSNTEPIREGDEVKMMCETDGNPQPEFDFSKDGINIK
EGVAGGLLTLKSVKRSDAGVYKCMATDFDNLDADLNGEVILSVHYIDPMSVRPAGPLSTM
TGDMVELQCKTKASDSHTVQWKKGSTVLSQTGVLSLKSVTFAEAGEYSCVGAVPSVLGLT
AKASVNLTVSGKPEIDAAVDGMVEKEGDMVTLSCSAHGHPAPQFTWTPSGKESVSVKGNK
VVSMVMLEASAAVLMDGVTCEASNDHGAASQAFKVTTKQAVDPNAANDTGRGNHVLKTAD
KQQGGSSGVVIAVVVCVLMLLLLVALLYFLNKKGKLPCSKKDNKEVESGNVNNDIVVEMK
TEKANEEAVLLNKPAAQQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggacgggatggttacatttggacgcgcttctctcctgtgcaccttgctgctttgcttt
tcattgcaagtgtgctgggccatcgtgacagtgacagtgactcccaaggtggaggtgatc
aagggagagtcagccagtctgccctgcaccttcataatccccaactccccgaacaacatc
gtggagtggttcattgaggagggtggcaccaggaagcgtgttgcgttccgctccgtgtcg
ggcggcgaggggaagagtgatgaggggacacgtctgtccgacagagtgaccatgggaagg
gacttctctctgaccatctcccccgtgacggtggaggaccagctgcccttctactgccag
gtcactgctggccctgccggggttggagaggccatcacacagctcaaagtcttcttcgct
ccagagatgccagaggtcactggatctaaccaggccatatctgttggtgactcctccaca
caggtgggccagtgtgtgagccataacggtcacccccagcccaggatcatctggttccag
gactccaagcctctgcctgaggtcaaggacaacaaagagaaggtgtacatggtgccgtcc
gtggtaaaggaagcatcaggtctgttcaccatcaccagcaccctgatgatgcagccccag
aaggctgacaaggacagcgtataccactgcaccgtggagtacagcatgcccaacgacatg
atcaaacagatcgactctgacaccttctccctcaccctcaactatccctctgagacagcg
acctttgtcctgtcgaacactgagccaatcagagagggtgacgaggtgaagatgatgtgt
gagacagatggaaaccctcagcctgagtttgatttctccaaggatgggataaacattaag
gaaggagttgccgggggacttttgactctgaagtccgtcaagcgttcggatgctggggtg
tacaagtgtatggccaccgactttgataacctggatgctgatcttaatggagaagtcatc
ctctctgtccactacattgacccaatgagtgtgaggcctgctggtccattgtcgacaatg
acgggagacatggtggagctgcagtgtaagaccaaggcctcagactcacacaccgtccag
tggaagaagggctccacggtgctgtcccagactggtgtcttgtctctgaagtcggtgaca
ttcgctgaagctggcgagtactcctgtgtgggtgcagtgccctctgtgcttgggctcacc
gccaaggccagcgtcaatctcaccgtctcaggtaaacctgagattgacgcagctgttgat
ggaatggtggagaaggagggagacatggtgactctgtcctgctctgctcacggacaccct
gccccacagttcacctggacaccctcaggaaaggaatcggtgtcggtgaagggtaacaag
gtggtcagtatggtcatgctggaggccagtgctgcggtcctgatggatggggtcacctgc
gaggccagtaacgaccacggcgcagcgtcgcaggccttcaaagtcaccaccaaacaagcc
gtcgatcccaacgcagccaatgatacaggcagagggaaccatgtgcttaaaacagctgat
aagcagcagggtggctccagtggcgtggtgatagccgtggtggtgtgtgtcctaatgctg
ctgctgctggtggcactcctctacttcctcaacaagaagggcaagctgccctgcagcaag
aaggacaataaggaagtggaaagtgggaatgtgaataatgacattgtggtggagatgaag
acagaaaaggccaatgaagaagctgtcctcctgaacaagccagcagcacagcagtga
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