Oncorhynchus tshawytscha (Chinook salmon): 121841650
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Entry
121841650 CDS
T05605
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
121841650
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
Transposable elements
121841650
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
121841650
NCBI-ProteinID:
XP_042167312
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Position
LG33:complement(15955227..15956271)
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AA seq
262 aa
AA seq
DB search
MASSADGIRYLCRLLGPRIKHRTARSHALSVEQMVCVALRFFASGAFLYSVGDAEQLNKA
TICRTIRSVCLAIKALADVFISFPGHRRLCDIKEEFYRIAGFPNVIGAVDCTHIRIKAPS
GAHEADFVNRKSFHSINVQMVCNADCVISNVVAKWPGSVHDSRIFRASEIYQCLSQGEFS
GVLLGDRGYGCQPFLLTPFTDPQEAQQAYNHAHARTRARVEMTFGLLKARFHCLHKLRVS
PVRACDITVACAVLHNVACLRK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatctgcagatggcatcaggtatctatgcagactactgggtcccaggattaag
caccgcactgcacggagccatgcactgagtgtggagcaaatggtttgtgtggccttgcgc
ttttttgctagtggagccttcctgtactcagtgggggatgcagaacagctgaacaaggcc
acaatttgccgcacaataaggagtgtgtgtctggctatcaaagcattagcagatgtcttc
atctccttccctggccacagaagactctgtgacatcaaagaggagttctataggattgca
ggtttccccaatgtcattggtgcagtggactgcacacacataaggataaaagccccctca
ggtgcccatgaggccgattttgtgaataggaaatcctttcacagcattaatgttcagatg
gtctgcaatgctgactgtgtgatcagcaatgttgtggcaaaatggcctggctcagtccat
gactccagaatctttcgggcctctgaaatctatcagtgcctatcacaaggtgaattctct
ggtgtgttgctgggagacagggggtatggctgccagccttttctcctgacacctttcaca
gacccccaggaagcacagcaggcctacaaccatgcccatgccaggaccagggccagagtt
gaaatgacctttggcctcctgaaggcacgctttcactgccttcacaaattaagggtcagc
cctgttagggcatgtgatattactgtggcttgtgctgtcctccacaatgtggcctgcctg
aggaag
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