Oncorhynchus tshawytscha (Chinook salmon): 121842428
Help
Entry
121842428 CDS
T05605
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04136
Autophagy - other
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121842428
04136 Autophagy - other
121842428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121842428
03029 Mitochondrial biogenesis [BR:
otw03029
]
121842428
Membrane trafficking [BR:
otw04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
121842428
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121842428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_NWD2_C
BCAS3_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
RMC1_N
EIF3I
Motif
Other DBs
NCBI-GeneID:
121842428
NCBI-ProteinID:
XP_042168353
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MEDRETFDGRGGPQDLISSSFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAESPDVY
IVERLFSSSLVVVVSLSIPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQRLVVCLEESV
YIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLAYPGSSTIGEIIVYDANNLSTVTM
IPAHDSPLAALTFNSSGTKLASASERGTVIRVFSIPEGQRMFEFRRGMKRYVNISSLSFS
PDAQFLCASSNTETVHIFKLEQHGPSGEEECPTWGSYVGKMFSAASSYLPAQVSGVMSQE
RAFATVRLLVAGQRNVCTLATIQKLPRLLVASSDGQLFIYNVDPQDGGECVLAQKHRLFG
EDEDKEEGVESEGSEVTVPVQACPSYAATVAIPATGPVTTTLTGYSEDGGAKKGEVIPEH
EFAAGPVCLDDENEFPPVSNQQLC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccgggagaccttcgacggtcgaggagggcctcaagacttgatcagctcctcg
ttcaaccaggacaccacgtctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcggtggacaagatggactgcatccatgaaggagcggagtctccagatgtgtac
atcgtggagcggttgttctccagcagtctggtggtggtggtcagtctctccatccccaga
cggatgaacgtctaccacttcaagaagggaacggagatctgcaactacagctacagtaac
aacatcctctctgtcaggctcaacagacagaggctggtggtgtgtctggaggagtccgtg
tacatccacaacatcaaagacatgaagctgctgaagacccttctcaacacgccctccaac
ccctcaggtctgtgtgctctgtccatcaaccattccaactcgtacctggcctacccaggc
agctccaccatcggagagatcatagtttacgatgccaacaacctgagcactgtcacaatg
atcccggcccatgacagtcccctggctgctctcaccttcaactcgtcaggcaccaagctg
gccagcgcctcggagaggggtactgtaatccgtgtgttctccatcccagagggacagcgt
atgtttgagttccgcagagggatgaagaggtacgtcaatatcagttccctgtccttcagt
cctgacgcccagttcctctgtgcctccagcaacactgagaccgtacacatcttcaaacta
gaacagcacggacccagtggagaggaggagtgtcctacctggggatcctacgtagggaag
atgttctctgcagccagcagctacctcccagcccaggtgtctggtgtgatgagtcaggaa
agagccttcgccactgtacgcctcctagtggccgggcagaggaacgtctgtaccctcgcc
acgatccagaagcttcctcgtctgctggtggcctcctctgacggacagctgttcatctat
aacgtcgaccctcaggatggaggagagtgcgtcctggctcagaaacacagattgtttggt
gaggatgaggacaaggaggaaggggtggagtcagaagggtcagaggtcacggtgcccgtc
caggcatgtccatcatacgccgccactgttgccataccagccaccggtccagtcactacc
acgctcacaggttactctgaggatggtggggctaagaagggagaggtgatcccagaacat
gagtttgctgctggtcccgtctgtctggatgatgagaacgagtttcctccagtgagcaac
cagcaactctgctag
DBGET
integrated database retrieval system
