Oncorhynchus tshawytscha (Chinook salmon): 121843243
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Entry
121843243 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04210
Apoptosis
otw04530
Tight junction
otw04540
Gap junction
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121843243
09143 Cell growth and death
04210 Apoptosis
121843243
09144 Cellular community - eukaryotes
04530 Tight junction
121843243
04540 Gap junction
121843243
09142 Cell motility
04814 Motor proteins
121843243
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121843243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
121843243
03036 Chromosome and associated proteins [BR:
otw03036
]
121843243
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
121843243
04147 Exosome [BR:
otw04147
]
121843243
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121843243
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121843243
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121843243
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121843243
Exosomal proteins of other body fluids (saliva and urine)
121843243
Exosomal proteins of colorectal cancer cells
121843243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
121843243
NCBI-ProteinID:
XP_042168748
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttccatgcatgtgggccaagccggagtccagatgggtaacgcctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
acctgtggaggtggagacgactccttcaacaccttcttcagtgagactggagctggaaag
catgtcccccgagccatcttcgttgacctggagcccactgtcatcgatgaggtgaggaca
ggtatctatcgtcagttgttccaccctgagcagctgatcactggtaaagaagatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgacattgtgctggac
aggacacgcaaactggctgaccagtgtacaggtctccaggggttcctcatcttccacagc
ttcggaggaggcaccggttctggtttcacatccctgctgatggaacgtctgtctgtcgac
tacggaaagaagtctaagcttgagtttgccgtttacccagctcctcaggtgtccacggct
gtggtggagccctacaactccatcctgaccactcacaccaccctggagcactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgtaggaaccttgacattgag
cgtccctcatacaccaacctcaacaggctcattggtcagatcgtctcttccatcactgcc
tccctgcgtttcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgccccagtcatctccgctgagaag
gcctatcacgagcagctgtcagtcgctgacatcaccaacgcctgctttgagccggccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgtctcctgtaccgt
ggtgacgttgttcccaaagatgtcaactctgccatcgctgccatcaaaaccaagaggagt
atccagtttgtggactggtgtcccactggcttcaaggtgggtatcaactaccagccccct
acggtggttcctggaggagacctggccaaggtccagagggctgtgtgcatgctgagtaac
accacagccatcgctgaggcctgggcccgtctggaccacaagtttgacctgatgtatgcc
aagagagcctttgtgcactggtacgttggtgagggcatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggattatgaagaggtgggcactgacagcgtg
ggagaagaggatgaggagggagaggaatattaa
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