Oncorhynchus tshawytscha (Chinook salmon): 121844138
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Entry
121844138 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
121844138
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121844138
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
U-box type E3
121844138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
121844138
NCBI-ProteinID:
XP_042169989
LinkDB
All DBs
Position
Unknown
AA seq
2508 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLNITLADLKRQIMGRERLKAVDCGLQITNAQTKEEYKDD
EALISKNSSVIIRRIPIGGVKASSKMYNIERFSEQNHFPVQNLPVGSSKGDRSSEHSHFS
VGSSKGIDDHASSISLAQLSKTANLAEANASEDDKIRAMMSQSNHDYDPIHYVKKLTGPP
PANYTCYRCGKNGHHIRNCPTNGNEKGFEPPQRIKKSTGIPRSFMKEVDDPSIKGAMLTN
TGHYAIPTIDAEAYALGKKERPPFVPRDQSSSEEDEDPVPDELLCLLCKDLMTDAVVIPC
CGNSYCDDCIRTSLLESEEHVCPTCSQSNVSPDALIANKFLRQAVNNFKNETGYTKRMMT
RVAQPPVVPTPTPPLQPHSRPQCPLQPIRSQQDPLMPRPSALDTPPLAQQQVGPPLRVGN
HNNSSHMAAGSSYNSTGPSPQHPTNHNNTLMLKEPESGGVQSVVVSADPPLATAPMAKEY
HVPVMSQSDGHSLQRTGNPPLPQPQSDGHSLQRTVPPPLPQPQSDDHSLQRTGNPHYPNP
HPQYPTPNPRLTVTPCRGQYPTPNPHPLLTVTPCRGQVTPHYPHYPNPSLTVTPCRGQVT
PHYPNPSLTVTPCRGQVLLPDFLKDHPIGTGTAPPVVAGTIATVPLPPSLRPPTCHPFST
TLPPFSPPLFPIPQVSYPPTTPSPLPRATAPSSYSLPPPGYPLPQESPTPWVPPNTQPPL
AGKPIPSSSFLSKDEFYRQQKRLKDNSDCRYGNREKSKLDEFTNDFAKELLEYRKIQKER
RRSYSRSRSSYSSSSYSKSRSRSRSYSRSSSRSRSRSRSRSRSRSRSYSRSSPYSRRHGR
PRGYRSRSRGYRRSRSPPPFRDGGGAGRGRGRGRGYRSRSRSPGQGGYRTHTPPPPSSRK
PAAAGAPPEGERKYPGRTRERDREPAAAGAPPEGERKYPGRTRERDREPAAAGAPPEGER
KYPGRTRERDREPAVYDWGPEHKDPYERERYREWEKEYREWYEKYFKNYNSHNPPPNNPP
PYRGRPPLGFAPAPVAPPAGRDRDPYNPPPPSDFYPSPRHRLDRGSSPFSRGRRRSEGFP
PPPSHPSPRGRNQPMTYQEKCAEQFGTLPLSRSANQDHQMPLKVAKGERDPSSSVASPAV
TVTSDLKEQKHRKRKKRKTEQGRGGGESFSASDSTDDARKEEKKKRTGSTPIGSSSHDDS
TPVRDEPIDSDASDSVPDKADRWTRDSKEEEVRRKSDRVYKRGPDSSVARKDSSSKSWKT
VRETDRDKTGTDRDKTGTDRDQTGTDRDQTGTDRDQTGTAGLVYQKTSLTEPSAKRVKDE
SIPLQPDSCTSLQREMELQHPAPLASAPKLPLPKPHADQLDTVRINPDLFKPVRTDPNQF
KPVRTDPDQFKPVRTDPDQFNTVRTDPDQFKPVRTDLDHSRPAKEEQRGKRDPGFRQDRG
SGREDKPRREADIRVGREQERDPGKAPDTKSEKKRRRRKEEEEEKKTTRKEERSMSDKEM
EVPRIKSPGVELTETVKPCNLKRDVEEERERASVRPPMESGMKGGEPQRKIKPNREEGRR
AGKLAGVAGTEAANQSGYIKGSVERSKAKRNRKVLASDGLGTTVDDTSPPGGSSPVCGDG
SEGRAEQRKTVVKTLEEYTNDSSAPADGHIVLIQVPRSKWEKEDYESEEEEGGGARVQLH
PLLTPFPPGPHITVTTETEAGRRKERDCTFSKPVRTMSPSSGRDREDGLQDGKHSGDPIP
SEKDGETERERDQLKEKEQERDKEQDRERGKEREREREHGRASDKDMDRPRKIPSSSQRP
ERREREGERTGERGIDHVSEKSSSQRPERTEREGERTGERGIDHISDKYSSQRPERERRE
REGERTGERGIDHVSEKSSSQRPERERRERTGERGIDHVSEKSSSQRPEREKREREGERT
GERGIDHVSEKSSSQRPERERRERGGERTGERGIDHVSEKSSSQRPERERRERGGERTGE
RGSNHVSEKSSSQRPERERRERGGERTGERGSDHSSEKSSSSSSHSYSRDRKPFSSSRDH
KATSDPRAREHRDHKHKDHNDQNSSTVDRNTNSTDRRPLDDQETTREHRDCLDPKHKDHR
ELGSASPVSKRALPPSDPSSSSTQRSQGSSEPTRPSESSPGRDTTQDRYPSPQVSISVEN
QPGRGKAEGEEPRVERSSAGRLSQQASLGNLEKEMSGGKPHQHPASLLQPPRTDNRAGVP
RAVRERERKKEREWQMQKMREKMEKERDEEGDKEVDREKEREGVDREKERERGVDREKER
ERGVDREKERERGVGREKERGRENPKVRPPPSVPSSRPPPSVPSSRPPPSVPSSRSPPSV
PSSRPPPDLVRETDEAFEPDYSEGEISEGEEEGERALEGERALEGERALEGEREVEGERE
VEGEREEHGGGSGRSRSSSASSVGSLGNKKDKKKKDRKEKKKQKKKKKKKDRKQKRQGSL
DAEEGEITGLKHKHKKKNKEKEEREEEEEEEEEEEERRGEDQMASVAL
NT seq
7527 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtacattataaattctcgtctaaactcaactacgacacggtcactttcgat
ggcctgaacatcactctggccgacctgaaaagacagattatgggtcgagagagactcaaa
gctgtcgactgcggcctacaaatcaccaacgcacaaactaaagaagaatacaaagacgac
gaggccctgatatccaagaactcctctgtcatcatcagaagaatacccatcggaggagtc
aaggcttcaagcaagatgtataacattgagcgtttttcagaacagaatcacttccccgtt
cagaacctccccgtcggatcctccaaaggagatcgttcttcagaacacagtcacttttcc
gtcggatcctctaaaggaattgatgatcatgcttcatctatatcactggcccaactctca
aagacggcgaacctggcggaggccaacgcatcggaggacgacaagatcagagccatgatg
tcacagtccaatcacgactacgaccccatacattatgtgaagaagttgacggggccccct
ccagccaactacacctgttatcgctgtggcaagaacggacatcacatcaggaactgtcct
actaacgggaacgagaaagggtttgagccgccccagaggatcaagaagagtaccggcatc
ccccgttccttcatgaaggaagtggacgacccgtctataaagggagccatgttgaccaac
accgggcactacgccatccctacgatagacgctgaggcctacgctttaggtaagaaggag
aggcctccgttcgtccccagggaccagtccagttccgaggaagacgaggatccagtccct
gatgagctcctctgtttgctctgtaaagacctgatgactgacgctgtggtcattccctgc
tgtggcaactcctactgcgacgactgtatccgtacgtctctgctggagtcagaggaacat
gtgtgtcccacctgtagccaatcgaatgtctcccctgacgcgctcatagccaataagttc
ctgcgccaggcggtaaataactttaagaatgagaccggttacaccaaacgcatgatgacg
agagtagcccagccccccgtcgtccccacccctacccctcctcttcagcctcattcccgc
cctcagtgcccgctccagcctatccggagccagcaggaccctctcatgccccgcccctca
gccttagacacgccaccattggctcagcagcaggttggcccgcccctcagagtcgggaac
cataataactcctcccacatggctgctggctcctcctataactcaacgggtccctccccc
cagcacccaaccaatcacaacaacacacttatgctaaaagagccagagagtgggggagtt
cagtctgtggtggtctcagccgacccccctcttgccactgcccccatggccaaggaatac
catgttccagtgatgagccagtctgacggtcactccctgcagaggacaggtaacccccca
ctaccccaaccccagtctgacggtcactccctgcagaggacagtaccccccccactaccc
caaccccagtctgacgatcactccctgcagaggacaggtaacccccactaccccaacccc
cacccccagtaccccacccccaacccccgtctgacagtcactccctgcagaggacagtac
cccacccccaacccccacccccttctgacagtcactccctgcagaggacaggtaaccccc
cactacccccactaccccaaccccagtctgacagtcactccctgcagaggacaggtaacc
ccccactaccccaaccccagtctgacagtcactccctgcagaggacaggtcctcctccca
gactttctgaaggaccatcccattgggacaggtacagcccctccggtcgtggcaggaacc
atagcgaccgtgcccctccctcccagcctccgcccaccaacgtgccaccccttctctaca
accctccctccattttctcctcccctcttccccatcccccaggtgtcatacccccccact
accccctccccacttccccgggcaacagccccctccagctactccctgccccctcctggc
taccccctaccccaggagtcaccaaccccctgggtgccccccaacacccagccccccctc
gccgggaagccaatcccctcctcttccttcctgtccaaggatgagttctacagacaacag
aagaggctgaaggataactccgactgtcgctacggtaaccgggaaaagtccaagctggat
gagttcaccaacgactttgccaaggagctgctggagtacagaaagatccagaaggagaga
cgacgctcttattccaggtctaggtcgtcctacagtagctcatcctactccaaatcccgt
tcccgttctcgttcatactcccgttcctccagtcgatccagatcccgttccagatcccgt
tccagatcccgttccaggtcttactcccgctcctctccgtactcccgccgccacggacga
cctcgcggctaccgctcccgttcccgtggctaccgccgatcacgctcgccgccgcctttc
agggacgggggaggggcgggacgggggagaggacggggacgaggttaccggtcacgctct
agatcacctggccaaggggggtaccggacccacactcctccacccccaagctcccggaag
cctgccgctgctggagcgccaccggagggtgagaggaagtacccgggccggacccgggag
agggatcgggagcctgccgctgctggagcgccaccggagggtgagaggaagtacccgggc
cggacccgggagagggatcgggagcctgccgctgctggagcgccaccggagggtgagagg
aagtacccgggccggacccgggagagggatcgggagccggcggtgtacgactggggtcca
gagcacaaagacccgtacgagagggagaggtaccgggagtgggagaaggagtacagggaa
tggtatgagaaatacttcaaaaactacaactcccacaaccctcctcccaataacccccct
ccctacaggggccgacccccccttggtttcgcccctgcccctgtggcacccccagccgga
cgagacagagacccctacaaccctcctccaccctcggacttctacccatccccccgacac
cgcctggaccgtggatcctcccccttcagtcgagggaggaggcgaagtgagggctttccc
cctcccccctcacacccctcccccaggggcaggaaccagccaatgacttaccaggagaag
tgtgctgagcagtttggaactctgccgctgtcccggtcagccaatcaggatcatcagatg
ccactgaaggtcgcaaagggtgagagagatccgtcgtcaagcgtcgcctctcccgcggtc
actgtgacctccgacctgaaagagcagaagcacaggaagaggaagaagaggaagactgag
caggggagagggggaggggagtccttcagtgcttctgactctacggacgacgctcggaaa
gaagagaagaagaagagaaccgggagtactcccattggttcgtcaagccatgacgactcc
accccagtacgggacgagccaatagacagcgacgcctcagactcagtcccggacaaagct
gataggtggaccagggacagtaaggaggaggaagtgaggagaaagagtgacagagtttat
aaacgcggaccggactccagcgtagcgaggaaagactcatcgtccaagagctggaagacc
gttagagagacagaccgggacaagactggtacagaccgggacaagactggtacagaccgg
gaccagactggtacagaccgggaccagactggtacagaccgggaccagactggtacagcc
ggtttagtctaccagaagacttctctaacagaaccgtcagccaaacgggtcaaagatgaa
tctattcccctccaaccagactcttgcacctccctccagagagagatggaactccaacac
cctgcgcccctagcatcagctcccaaactacctcttcctaaaccccacgcagaccaactc
gacacagttagaatcaacccagacctattcaaaccggttagaaccgacccaaaccaattt
aaacctgtcagaaccgacccagaccagtttaaacctgtcagaaccgacccagaccagttc
aacacagttagaaccgacccagaccagtttaaaccggttagaactgacctggaccattcc
agaccagccaaagaggagcagagagggaagagagatccagggtttcggcaggacaggggc
tcagggagagaggacaagcccaggagagaggctgacatcagggtgggtagagaacaggag
agagaccctggcaaagctccagacaccaagtctgagaagaagaggaggaggaggaaggag
gaggaggaggagaagaagacgacgagaaaggaggagaggagtatgtctgataaggagatg
gaggtgccccgaatcaaatctcccggagtggagctcaccgagaccgtaaaaccctgcaac
ctcaaacgtgacgtagaggaggagagggagagggcttccgtaaggcctccgatggagagt
gggatgaaaggaggagaaccccagaggaagattaagcccaacagagaagaagggaggagg
gccggcaagcttgcgggcgtggccggaacagaggcagccaatcagagcggctatataaag
ggaagcgtggagaggagcaaagccaagaggaaccgtaaggtcctagcgtccgacggactg
ggaaccacagtggacgacaccagtcctccagggggcagtagtcctgtgtgtggcgatgga
tcagagggcagagcagagcagaggaagactgtcgttaaaacactggaggaatacaccaac
gacagctcggcacctgctgacggacatatagtactcatacaggtccctcgctccaagtgg
gagaaggaggactacgaatcagaggaagaggaaggaggaggggccagggttcaactccac
cccctgctcacccctttcccccctggaccccatatcaccgtgacgacggagacggaggca
gggcgaaggaaagagagggactgtaccttttccaagccagtgagaactatgtccccctct
agtggcagagacagagaagacggcctgcaggatggaaaacactctggagaccccatccct
tctgagaaagacggagagaccgagagagagagagatcagttaaaggaaaaggagcaggag
agggataaagaacaggacagagagcgggggaaagagagagaaagagagagggaacacggc
cgtgcttctgacaaagatatggacagaccgagaaagattccctcttcctctcagcggccg
gagaggagagagagagaaggagagaggactggggagagagggatcgaccacgtcagtgag
aagagctcctctcagcggccggagaggacagagagagaaggagagaggactggggagaga
gggatcgaccacatcagtgacaagtactcctctcagcggccggagcgagagaggagagag
agagaaggagagaggactggggagagagggatcgaccacgtcagtgagaagagctcctct
cagcggccggagcgagagaggagagagaggactggggagagagggatcgaccacgtcagt
gagaagagctcctctcagcggccggagcgagagaagagagagagggaaggagagaggact
ggggagagagggatcgaccacgtcagtgagaagagctcctctcagcggccggagcgagag
aggagagagagaggaggagagaggactggggagagagggatcgaccacgtcagtgagaag
agctcctctcagcggccggagcgagagagaagagagagaggaggagagaggactggggag
agagggagcaaccacgtcagtgagaagagctcctctcagcggccggagcgagagagaaga
gagagaggaggagagaggactggggagagagggagcgaccacagcagcgaaaagagctcc
tcttcctcctcacactcttactcacgagatcgtaaacctttttcttcttccagggaccac
aaagcgacctctgaccccagagccagggagcacagagaccacaaacataaagaccacaac
gaccagaactcctccaccgttgaccgtaacaccaactctactgaccgtagaccactagac
gaccaggagaccaccagagaacacagagactgcctcgaccccaaacacaaagaccacaga
gagctaggcagtgcctctcccgtctccaagagagccctacccccatcggacccctcctcc
tccagcacccagagatctcagggaagctctgagcccaccagacctagcgaaagcagccct
ggcagggacacgacgcaggacagatacccctctcctcaggtctccatctccgtggagaac
cagcccgggagggggaaggctgagggagaagagcccagagtagagcgctcctcagcgggg
agactgagccagcaggccagcctaggaaacctagagaaggagatgagtggtggaaagccc
caccaacacccagcctcactcctacagccccccaggactgacaacagggcaggggtgccc
agagctgtcagagagagagagagaaagaaagagagagagtggcagatgcaaaagatgagg
gagaagatggagaaggagagagatgaggagggagataaagaggtcgatagggagaaggag
agagagggggtcgatagggagaaggagagagagagaggggttgatagggagaaggagaga
gagagaggggttgatagggagaaggagagagagagaggggtgggtagggagaaggagaga
gggagggagaaccctaaagtcagacctcctccctcggtcccttcttccagaccccctccc
tcggtcccttcttccagaccccctccctcggtcccttcttccagatctcctccctcggtc
ccttcttccagacctcctcctgacctggtcagagagactgatgaggccttcgaacctgac
tacagcgagggagagatctcagagggggaggaggaaggagagagagcgctggagggagag
cgagcgctggagggagagagagcgctggagggagagcgagaggtggagggagagagagag
gtggagggagagagagaggagcatggggggggcagcggcagaagtcgtagcagcagcgcc
agctctgtcggtagcctgggcaacaagaaagacaagaagaagaaagatagaaaagagaag
aagaaacagaagaagaagaagaagaagaaggatagaaagcagaagagacaggggagcctg
gacgctgaggagggagagatcacgggactgaaacacaaacacaagaagaagaacaaggag
aaagaggagagagaagaagaagaagaggaggaggaggaggaggaggagagaagaggagaa
gaccaaatggctagcgtggccttatga
DBGET
integrated database retrieval system
