Oncorhynchus tshawytscha (Chinook salmon): 121844286
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Entry
121844286 CDS
T05605
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121844286
09142 Cell motility
04814 Motor proteins
121844286
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121844286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
121844286
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
121844286
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
121844286
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
121844286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynein_IC2
WD40
SNAPC2
Motif
Other DBs
NCBI-GeneID:
121844286
NCBI-ProteinID:
XP_042170144
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKESESLQQKTENVSEDSDLDRKRRET
EALLQSIGISPEPPLVQPLQLLTWDTCYFHYLVPTPMSPSSQSVSTTSDAGSQESVDGGT
VGRYRTLQWDTDPSALQLQADSELGRRMHRLGASKIVQIDFVPKELVTYTKETQTPSAAH
QSEEEEEDEESSEPKASPQTDQPEEEGEAEDSKEAHPRELTEEEREQILHSEDFLVFFER
SVSVVERALAEEGDIFFDYSGRDLEDKEGDMQGGSNLSFNRVFHDDHWSKHRVVTCLDWS
PQYPELMVASYNSNEDAPHEPDGIALVWNMKFKKTTPEYTFHCQSSVMSVGFAQFHPNLV
VGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGKMC
SWSLDMLSQPQESMELVYNKSKPVAVTGMAFPAGDVNNYVVGSEEGMVYSASRHGSKAGI
AEMFEGHQGPVTGISCHNAVGTVDFSHLFITSSFDWTVKLWSIKHNKPLYSFEDNADYVY
DVSWSPVHPALFASVDGMGRLDLWNLNNDTEVPTASVTIEGACALNRVRWASGGREVAVG
DSEGRVWIYDVGELAVPHPEDWSHFARTLVEIRANRGDGEEEGAVELPA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagcgacctgaaagctgagctagagcgaaagaaacagaggctagctcaa
atacgagaggagaagaagagaaaggaggaggagaggaaaaagaaagagtctgagagtctg
cagcagaaaacagagaatgtctctgaagattctgacttggaccgcaaacgaagagagacg
gaggcgctgctgcagagtattgggatctcaccagaaccaccattagtgcagcctctgcag
ctcttaacatgggatacctgttattttcattatttagtcccaacccctatgtctccctct
tcacaatcagtgagcaccaccagtgatgctggcagccaggagtccgtagatggggggaca
gtgggaagatataggaccctgcagtgggacacggacccctctgctctccagctgcaggca
gactctgagctggggcgcaggatgcacagacttggagcgtcaaaaatagtacagattgac
ttcgttcccaaagagcttgtgacctacactaaagagacccagactccttcagcagcacat
caatctgaagaagaagaagaggatgaggagagcagtgagcctaaagcttcccctcagact
gaccagccggaggaggaaggagaggcagaggacagtaaagaggcccatcccagagagctg
acggaggaggagagggaacagattctccactcagaggacttcctggtgttctttgagcgg
tcggtctctgtggtggagcgggcgctggccgaggagggagacatcttcttcgactacagc
ggccgggacctggaggacaaagaaggggacatgcaaggtggatccaatctgtctttcaac
cgtgtgttccatgacgatcactggtccaaacatcgagtagtcacctgcttagactggtcc
ccacagtaccctgaactgatggtggcctcttacaacagcaacgaggatgctccacacgag
cctgatgggatagcgctggtgtggaacatgaagttcaagaagaccactccagagtataca
tttcactgccagtcgtcagtgatgtctgtgggctttgctcagttccatcctaacctggtg
gtggggggaacgtactcaggacagattgtgttgtgggataaccgtagtcacaggaggacc
cccgtccagaggacccctctgtctgctgcagcacacactcacccagtgtactgtgtgaac
gtggtgggtacccagaacgccaacaacctgataacagtgtctactgatgggaagatgtgc
tcctggagtctagacatgctctctcagcctcaggagagtatggagctggtctacaataag
tccaagcccgtagcagtaacaggaatggccttccctgccggagatgttaacaactacgta
gtgggaagcgaggaagggatggtgtactctgcgtcccgccacggcagtaaagcaggtata
gctgagatgtttgaggggcaccagggcccagtgactgggatcagctgccataacgctgtg
ggcactgtggacttctcacacctcttcatcacgtcctcctttgactggactgtaaaactg
tggtccatcaagcacaacaagccactgtactcctttgaggataatgcagactatgtctat
gatgtcagttggtcccctgtgcatccggctctctttgcctccgtggatgggatgggtcgt
ttggacctgtggaacctcaacaatgacactgaggtgcccacagcgagtgtgacgatcgag
ggggcgtgtgctctaaaccgtgtgagatgggcgtcgggaggcagagaggttgccgtgggt
gactcggagggccgtgtctggatctacgatgtgggagagctggcagtgccacaccctgag
gactggagccacttcgctcgtaccctagttgagatccgtgccaaccgcggggatggagag
gaggagggggccgtggagctgccagcctga
DBGET
integrated database retrieval system
