Oncorhynchus tshawytscha (Chinook salmon): 121844299
Help
Entry
121844299 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: FERM and PDZ domain-containing protein 1-like
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
121844299
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
FERM domain-containing proteins
121844299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
PDZ
PDZ_6
RA_2
FERM_C_FAK1
PDZ_2
FERM_f0
TUG-UBL1
RBD
Motif
Other DBs
NCBI-GeneID:
121844299
NCBI-ProteinID:
XP_042170166
LinkDB
All DBs
Position
Unknown
AA seq
1723 aa
AA seq
DB search
MEERDRSRSPSRRTSRVEQVVGRWLRRSRDSSSRERILVDGKAAAGGESSGQDQKNSYPV
RLTIQILRDPLLNTHGITLTPQTPILVQDITPAGPADGRLIPGDQVVKINNVAVDDLTPE
QAADLIRECQHSVMITVLRNSAGPKSSFITPEKRAKLRSNPVKVRFAEEVEVNSHSQGNS
LLFLPNVLKVYLENGQTKAFKFEPNTTVKDIVMTVCSKLSLSRIEHYSISKLLLLEQEYS
ISKLLLLHEEERIQQVVHQKEVHDYRCLFRVCFIPREPEHLLQDDPTAFQYLYLQGINDV
LQERFAVEMRCNTALRLAALHIQERLASCGQSPRTKLKIITKSWGIENFISSTLLRNMRE
KDLRKAIGYHMKKSQSQEPKQKVLSANQAKINYLEELCDLKSFGGKSFSATMMLQDRESM
VTLLVGSRYGISQVVNHKLSIMTTLTEFSSITRIELLPESDRVXLVKIYLQDIKPITLLL
ESVAAKELSCLVAGYCRALVDPSLIIFPWTQDGKQHRVSAEEGYVSRGGSDSDDSSDMDM
DTLISLVSHNNKRTTSDPVGLRRIMEERKEERKERKEREERKKNEKGEAEQEKNMKYGTM
SPLISSDSLDALEEDDLIACSSSLPHPHPPFRLTVEPPHPQPHPREGASSPQGVAGEWRG
DNLNYAELSLMLEYLPSPPEASDDEDEEEKREERRRSNEGTGQEVLSVSGCLRSSSSSLM
DCVFTFEQSDARHYYNICPNVTPDSTHSLTHPHPETEEEEGGGEEEEQGALLTLEPVPIL
QPPPGFGDSSSDEEFFDARDRIASPENPTSGTVSRGVSGLLLSCKTDFTSTVSYPGPDQN
QERNWNPDHVPDQHLDLAQNRTESSDESQQLSLDPEPSEQSQNPCPTISSLSHAEGEASQ
LESKPILAKPSPEGSHRGPGEPRVLGNPKGNPRAPDNPKGDLHRSSRNRRQSMETEPDMM
ESKSVTALVTAASLSITAVRCRVEPDGVYGRDTGGEQGVAGGEESVTPLSAPPPPTSPLP
PFPAPSIPHTERAERDSKDGNVGLPPPALLTGHHRAKPLGLHITGKIQSLPLYLSRSQET
LTLSGVGSPNRSPSPETTSNKTEVMVTTETTKYDDVTKVATGEDLKDSGVALVESDDSEV
TLTESEVGEVVVETAGAEITRLTVSEVKEVIEKVVMVYGSSLPPPLAPISLESKPDPKMV
VKLPTCPIATVVTAPPMAPAPICLEPKPVPELLSPGSTIHKMAAPLPSCPSFRVPIRVEP
KPDHEPLSIRSKMAALSSSYPPALVVTTESLNSSSSNPHPIRVEPMPEPCLEPFSGPKMS
APLSSCPSALVVTTQSLVVTTQSLVVTTQSLNGPGLSFPGSNMRGQPFGSNSFCRPPGEE
AGLLNTLTTGCGVFTSTCETQPNQAHMESYSPAKPDFGCSSVLASGCETVMEGVQTPLEA
CRCPPPLVYTNCFSGGDSFDDELTVYEFSCRTSSPPASQPSSSALALPLTTSPPLSSFLS
SSPPSSLLSPSFPRSVLPPSSSMELSPLLSPLLSPSNCFLSQSSLHDDISRLRHRRFPPP
PAGFQTVRSDVDELLTLLQGGRMGSRGGRHPRETCATHFSENKRLLHGEARRLMAGCQKV
VRVGQTPDEMLFSLSDSFRTLVGMAGMCLWFSGCDRCDRRNAEALAGLADVARTYREFVL
AAERASGRRSCHDLSTKLLAKQCTALTASVFCLTQLFRTLTAL
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgggacagaagccgctccccgtcccgcaggaccagtcgggtggagcaggtg
gtggggcgatggctacgacgctccagggattccagcagcagagagcgtatcctggtagat
gggaaggcggctgcggggggagagtctagcggtcaggatcagaagaacagctacccggtt
agactgaccatccagatcctacgagaccccctcctcaacactcatggaatcaccctgaca
cctcagacacccatactggtgcaggacatcaccccagcggggccggctgatggaaggctc
atccctggcgaccaggtcgtaaagatcaacaatgttgccgtcgatgacctgaccccagag
caagcggctgacctcatcagggagtgtcagcactctgtgatgataacggtcctcagaaac
tcagcgggacccaagtcttccttcatcaccccagagaagagagctaaactccggtccaac
ccggtcaaagttcgctttgctgaggaggttgaggtcaatagtcactctcagggcaactcg
ctgctcttcctccccaacgttctaaaggtgtatctggagaacggacagaccaaggccttc
aagtttgaacccaacaccactgtcaaggacatagtaatgactgtctgttctaaactgtct
ctgtctcgtattgaacactacagcatcagtaaactgctgttactggaacaggaatatagc
atcagtaaactgctgttactacatgaagaggagaggatacaacaggtggttcatcagaag
gaagtccatgactacagatgtctgttcagagtgtgttttatacccagagaacctgagcac
cttttacaagacgaccccactgccttccagtacctctacctgcagggtataaatgacgtg
ctacaggagcgttttgcagtggagatgcgttgcaacacggccctgcgtctggcagccctg
cacatacaggagagactagccagctgtggacagtcacctcggaccaaactcaagatcatc
acgaagagttggggcattgagaactttatctcttcaaccctcctgaggaacatgagggaa
aaggatctgagaaaggccattggctatcacatgaagaagagccaatcacaggagccaaag
cagaaggtgctgtcggccaatcaggcgaagattaactacctggaggagctgtgtgacctc
aagtccttcggcgggaagtccttcagcgccaccatgatgctccaggacagagagtcgatg
gtgaccctgttggtggggtcgcggtacggtatcagtcaggtggtgaaccacaaactgagc
attatgaccaccctcacagagttcagcagtatcacacgcatagagctgctaccagagtct
gaccgcgtcngtctggtcaagatatatctacaggacatcaagccgatcaccctgttgttg
gagtcagtagcagctaaggaactgtcctgtctggtggcagggtactgtcgtgccctagtg
gaccccagcctcatcatcttcccctggacacaggacggcaagcagcaccgcgtgtctgcc
gaggagggttatgtgtcgcggggtggcagtgactcggacgattcctccgacatggacatg
gacactctcatctcccttgtatcccataacaacaagcgaaccacatcagacccggtcggt
ctacgccggattatggaggagaggaaagaggagaggaaagagaggaaggagagagaggag
aggaaaaagaatgagaagggagaagcagaacaagagaaaaatatgaaatacggaactatg
tctccactcatctccagtgactccctggatgctctggaggaagatgacctgatcgcctgc
tcttcctccctccctcaccctcaccctcccttccgcctcacagtggagccccctcatccc
cagcctcacccacgagagggtgcatcctcaccccaaggagtggcaggagagtggagagga
gataacctgaactacgctgagctctctctcatgctggagtacctccccagtcctccggag
gcgagtgacgatgaggatgaggaggagaagagggaagagaggaggaggagtaatgaagga
actggacaggaggtattgtctgtatccggatgtctccggtcctcctcctcctcacttatg
gactgtgtgtttaccttcgagcagagcgacgcgaggcattactacaatatctgccctaat
gttacccccgacagcacccacagcctcacccaccctcaccctgagactgaggaagaggaa
ggtggtggtgaggaggaagagcagggggcgctcctaaccctagagcccgtgcccatcctc
cagccgcctccagggttcggagacagcagttctgacgaggaattctttgatgcgagggat
cggatcgcctcgcctgaaaacccaacatcagggactgtgtccagaggtgtgtcagggttg
ttactgtcctgtaagaccgacttcacctcaacagtctcctaccctggaccggaccaaaac
caggagcggaactggaacccagatcatgttcctgatcagcatctggacctggcacagaac
cggacagagagctcagacgaaagccagcagctgagtctggacccagaaccatctgagcag
agccagaacccatgtcctactatctcctctctgagccacgccgagggtgaggcgtcccag
ctcgagtccaagcctatcctcgccaagcccagcccagaggggtcccatcggggacctgga
gagccacgtgtgcttggtaacccaaagggaaatccacgggcgcctgataacccgaagggt
gacctccataggagctccaggaacaggcggcagtccatggagacggagcccgacatgatg
gagtccaaatcggtcacggccctggtgacggcagcctccctctccatcacggctgtccgc
tgtagagtagaaccagatggtgtgtatgggagggacacggggggtgaacaaggcgtggct
ggtggtgaggagagcgtgactcccctttctgctcctcctccccccacctctccactgcca
cccttcccagccccctccatcccccacacggagagggcagagagggatagcaaggatggg
aatgtggggcttcctcctccggccttgctcaccgggcatcatcgggcaaagcctctcggc
ctccacattacggggaagatccagagcctgcccctatatttatctcgctcccaggaaacc
ctcaccctctctggggtgggaagccccaacaggagcccctctccggagaccaccagcaac
aagactgaggtaatggtcaccaccgaaaccaccaagtacgacgatgtcacaaaggtggca
acaggggaggatttgaaagattccggggtggcgttggtagaatcggatgattctgaggtt
acgctgacagaatcggaggttggcgaggttgttgtggagacggccggggcggaaatcacg
aggttgacggtttcagaggtcaaggaggtgatcgagaaggtcgtgatggtctacggatcc
tcccttcctccccctttagcacccatctctctagagtccaaaccagatcccaaaatggtt
gtcaagttgcctacctgtcccattgctacagtggtaactgcccctcctatggctccagca
cctatctgtctggagcccaaaccagtccctgaactactctccccaggctccactatccac
aaaatggccgccccattaccttcctgtccttcctttcgcgtgcccatacgcgtagagccc
aaaccagaccatgaaccactatccatacgctccaaaatggccgccttgtcgtcttcttat
ccccctgctttagtggtaaccacagagagtctgaattcctcttcttctaatcctcacccc
atcagagtagaacccatgccagagccttgccttgaacccttttcaggccccaaaatgtct
gctccgttgtcttcctgcccctctgctttagtggtgaccacacagagtctagtggtgacc
acacagagtctagtggtgaccacacagagtctgaacggaccggggctcagcttccctggt
tctaacatgagaggacagccatttgggagcaatagcttctgtagacccccaggtgaggag
gcaggcctgctgaacactctgactacagggtgtggggtcttcacctccacctgtgagacc
cagcccaaccaggcccacatggaatcctattcgccggccaagcctgactttgggtgtagc
tcggtgctggcgtcagggtgcgagacggtcatggagggggtgcagacgcccctggaggca
tgcaggtgtccaccaccgctggtttataccaactgtttcagcgggggtgacagcttcgac
gatgagttgacagtttacgagttctcctgtcggacaagttctcctcccgcctcccaaccc
tcttcctctgcgctggccctccctctcacgacctctcctcctctctcctctttcctctcc
tcctcccctccctcctccctcctctctccctccttccctcgctccgtcctgcccccctcc
tcctccatggagctctcaccactcctctccccgctcctttccccgtccaactgcttcttg
tcccagtcaagtctccatgatgatatcagccgactacgccaccgccgcttcccaccgccc
cccgcagggttccagaccgtccggagcgacgtggacgagcttctcaccctcctgcagggg
gggaggatggggagcagaggggggaggcaccccagggagacctgcgccacccacttctca
gagaacaagcgtcttctccacggggaggcccggaggctgatggctggctgtcagaaggtg
gtccgggtggggcagaccccagacgagatgctcttctccctctccgacagcttcaggacc
ctggtgggcatggccggcatgtgcctatggttctctgggtgcgaccggtgcgaccggagg
aatgccgaggcactggcggggctggcggacgtggccagaacgtaccgggagtttgtactg
gcggcggagagggcgagcgggaggcggagctgtcatgacctcagcaccaagctccttgcc
aagcagtgtaccgccctcactgcttccgtcttctgcctcacacagctgttccgcacactc
accgcactctga
DBGET
integrated database retrieval system
