Oncorhynchus tshawytscha (Chinook salmon): 121844370
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Entry
121844370 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
121844370
Pattern recognition receptors [BR:
otw04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121844370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
PYRIN
DUF7639
Motif
Other DBs
NCBI-GeneID:
121844370
NCBI-ProteinID:
XP_042170326
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MKSDRSMKQQNRQERSESETLSGQSSQSHQTDLASIFSMLEKKIMTFVKNELKMLKRILS
PELPEGFESQKQDKEVVDAEDEKQESSAREGALKITLHILRKMNQKELADTLEKNELAVI
CQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELYITEGGTGEVNNEHELRQIETTTR
KQARPETAIKCNDIFKPLTGQDKPIRTVLTKGVAGIGKTVSVQKFILDWAEGKANQDVQF
VFSFPFRELNLMKXDKHTFIELLNHFSMETKQSRISNYDKYKVLFIFDGLDECRLPLDFQ
KNKICWDVTESTSVDVLLTNLIKGNLLPSALLWITTRPAAANKIPSGCVDQVTEVRGFND
PQKEEYFRKRFSDEDLASRIISHIKTSRSLHIMCHIPVFCWISATVLEHMLKHKREEMPK
TLTEMYTHLVVFHTKQKNEKYLGKEETGPHWNKESILSLGKLAFQQLVNGNLIFYEEDLK
EAGIDVNEASVYSGLCTQLFKEECGLYQDKVYCFVHLSIQEFLAAVYVFLSFINNNENLM
DKLQSTSRNFSVRIKQRCKVTVYKSAVDKALQSETGNLDLFLRFLLGLSLESNQKHLRGL
LTKTRSSSQSHEETVKYIKEKIGEDLSPERSINLFHCLNELNDHSLVEEIQSYLRSGSLS
KPKLSPAQWSALVFVLLTSEKELDVFDLKKYSRSEEGLLRLLPVVKASRAALLSGCGVTE
EGCASLVSALRSNPSHLRELDLSNNDLKDSGVKLLSAGLGNPHCKLETLRLSGCLVTEEG
CASLVSALRSNPSHLRELDLSYNHPGDSGVRLLSAGLEDPHCRLEKLNVEHGGENRMKPG
LRKYACDFTLDPNTVNKLLSLSKENRKVTWRTEEQPYPDHPERFEVCRQVLCREGLTGRC
YWEVEWSGRGADIGVTYKGISRRGGVNDCCLGYNDKSWSLDCSDNSYTACHNNNPTTIDV
PSSSSHRVGVYLDWPAGTLSFYRASSDTLTHLITFTSTFTEPLYPGFGVYYDSSVSLE
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgaccggtctatgaagcaacaaaaccgacaggagagatcagagtcagagact
ctcagtggtcagtcttcccagagtcatcaaacagacctggcctccatattcagtatgctt
gaaaagaaaattatgacatttgtgaagaacgagctgaagatgttaaagaggattcttagc
ccagaactcccagaaggctttgagagtcagaagcaggataaggaagtggtggatgctgaa
gatgagaagcaggagagcagtgccagagagggggctctgaagatcacactgcacatcctg
aggaaaatgaaccagaaggagcttgctgacacactggagaaaaatgagcttgctgtgatt
tgccaacgtgaactcaaatctaatctaaagaagaagtttcaatgtgtatttgaggggatc
gctaaacaaggaaacccaacacttctcaataagatctacacagagctctacatcacagag
ggtggaacaggagaggtcaataatgaacatgagctgagacagattgagacaacaaccagg
aaacaagcaagaccagagactgcaatcaaatgtaacgacatcttcaaacccttaactgga
caagacaaacctatcagaactgtgctgacaaagggagtcgctggcattggaaaaacagtc
tctgtgcagaagttcattctggactgggctgaaggaaaagcaaatcaggatgtccaattt
gtattttcattcccttttcgggagctgaatttgatgaaanaggacaaacacactttcatt
gaacttcttaatcacttctcaatggaaaccaaacaatcaagaatctccaactacgacaag
tacaaagttctgttcatctttgatggtctggatgagtgccgactgcccctagacttccag
aagaacaagatctgttgggacgtcacagagtcaacctcagtggatgttctgctgacaaat
ctcatcaagggaaatctgcttccctctgctctcctctggataactacccgacctgcagca
gccaataagatcccttcagggtgtgttgaccaggtgacagaggtacgagggttcaatgac
ccacagaaggaggagtacttcaggaagagattcagtgatgaggacctggccagcagaatc
atctcacacataaagacatcaaggagcctccacatcatgtgccacattccagtcttctgt
tggatttctgcaacagtccttgaacacatgctgaaacataagagagaagagatgcccaag
actctgactgagatgtacacacaccttgtggtgtttcataccaaacagaagaatgaaaag
tatcttgggaaagaagagacaggtccacactggaataaagagagcattctgtcactggga
aaactggcttttcaacagcttgtgaatggcaatctgattttctatgaagaagacctgaaa
gaggctggcattgatgtcaatgaagcctcagtgtactcaggattgtgcacacagctcttt
aaagaggaatgtgggctgtaccaggacaaggtgtactgctttgttcatctgagcattcag
gagtttctggctgctgtatatgtgttcctctcattcatcaacaacaatgagaatctaatg
gacaaactgcaatcaacatccaggaacttttctgtgaggatcaaacaaaggtgtaaagtt
actgtctacaagagtgctgtggataaagccttacaaagtgagacaggaaacctggacctt
ttcctccgcttccttctgggcctctcactggagtccaatcagaagcacttacgaggtcta
ctgacaaagacaagaagcagctcacagagccatgaagaaacagtcaagtacatcaaggag
aagatcggggaggatctctctccagagaggagcatcaatctgttccactgtctgaatgaa
ctgaatgaccattctctagtggaggagatccaaagctacctgagatcaggaagtctctca
aaacccaaactgtcacctgcacagtggtcagctctggtctttgtgttgctgacttcagaa
aaggagctggatgtgtttgacctgaagaaatactccagatcagaggaaggtcttctgagg
ctgctgccagtggtcaaagcctccagagctgctctgctgtcaggctgtggagtcacagag
gaaggctgtgcttctctggtctcagctctgaggtcaaacccctcacacctgagagagctg
gatctgagtaacaatgacctgaaggattcaggagtgaagctgctctctgctggactgggg
aatccccactgtaaactggagactctgaggctgtcaggctgtctagtcacagaggaaggc
tgtgcttctctggtctcagctctgaggtcaaacccctcacacctgagagagctggacctg
agctacaatcacccaggagactcaggagtcagactgctctctgctggactggaggatcca
cactgcagactggagaaactcaatgtggaacatggtggagagaacagaatgaaacctgga
cttagaaaatatgcctgtgacttcacgctggacccaaacacagtaaacaaactcctctct
ctgtccaaggagaacagaaaggtgacatggaggacagaggagcagccgtatcctgatcac
ccagagagatttgaggtctgtagacaggtgctgtgtagagagggtctgactgggcgctgt
tactgggaggtagagtggagtgggagaggggctgatataggagtgacatataaaggaatc
agcaggagaggaggggttaatgactgttgtcttggatacaatgacaagtcctggagtctg
gactgctctgacaacagttacactgcctgtcacaataataatcccactaccatagacgtc
ccctcctccagctcccacagagtaggagtgtatctggactggccagccggcactctgtcc
ttctatagagcctcctctgacacactgacccacctgatcacattcacctccacattcact
gagcccctctatccagggtttggggtttattatgactcctcagtgtccctggaataa
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