Oncorhynchus tshawytscha (Chinook salmon): 121844523
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Entry
121844523 CDS
T05605
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
otw04137
Mitophagy - animal
otw04144
Endocytosis
otw04340
Hedgehog signaling pathway
otw04350
TGF-beta signaling pathway
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121844523 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121844523 (smurf1)
04350 TGF-beta signaling pathway
121844523 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121844523 (smurf1)
04137 Mitophagy - animal
121844523 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
121844523 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121844523 (smurf1)
04121 Ubiquitin system [BR:
otw04121
]
121844523 (smurf1)
03029 Mitochondrial biogenesis [BR:
otw03029
]
121844523 (smurf1)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121844523 (smurf1)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121844523 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
121844523 (smurf1)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
HECT type E3
121844523 (smurf1)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121844523 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
C2
WW
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
121844523
NCBI-ProteinID:
XP_042170673
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MSGPGSRRTGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKRQGAGFLGCIRLLANSISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDGLGSGGPVVDCRGLLENEGPVFESCFSEEPLPYSDPTGA
AGGGTCPPDSPNQENRLQAQRIRSQDSQRHTHTPQNRPHGNQSPDLPEGYGERDGETHPT
LQGQVYFLHTQTGVSTWHDPRIPRDLASVSYEELGPLPAGWEVRSTVSGRIYFVDHNNRT
TQFTDPGYTPSSGTLVHTHQHSQVKDSSQPLGGGGGREMEVGGEEGGEGEVTLRYERDLV
HKLKLLRHELSLQQPQAGHCRIEVSRDEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLD
YGGVAREWLYLLCHEMLNPFHGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLA
VFHSHYINGGFTLPFYKQLLGKPIMLQDLETTDPELHKSLVWILENDISSVLDHTFCVEH
SAFGKFLQHELKPNGQNLPVTEDNKKEYVKLYVTWRFMRGIEAQFLALQKGFSQLIPQHL
LKPFDHKELELIIGGLGKIDLADWKSNTRLKHCAVDSNVVCWFWEAVESFTEERRGRLLQ
FVTGSTRVPLQGFKALQGSAGPRLFTIHLIEANTDNLPKAHTCFNRIDIPPYESYEKLYE
KLLTAVEETCGFAVE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcctgggtctcggaggaccgggtccagcatcaaaatccgcctgacagtctta
tgtgccaagaaccttgcaaagaaagacttcttccggttgccggacccatttgcaaaggta
gtggtggatggatcaggacagtgtcattctacagacacagtgaagagcactctggacccc
aaatggaaccaacactatgacctgtacatagggaagacggactccatcaccatcagtgtg
tggaaccataagaagatccacaagcggcagggcgccgggttcctgggctgcatacgactg
ctggctaactccatcagcagactgaaagacacgggctaccagcggttggatctgtgtaag
ctgaatccatcagatagtgatgcagtacggggacagatcgtagtgagcctccagaccaga
gatggtttgggcagcggaggacccgtggtcgactgtagaggactgttagagaatgagggg
cctgtgtttgagagctgtttcagtgaggagccgctgccatactcagaccccacgggcgcc
gctgggggcgggacctgtccaccggattcacccaaccaggagaaccggctccaggctcag
cgaatcagaagccaggattcccaaagacacacccacacccctcagaaccgaccacatggc
aaccaatcacctgatctgcctgagggatacggtgagagagacggagagacgcatcctacc
ctgcagggacaggtgtattttcttcacacacagacgggagtcagcacctggcatgaccca
cgcatacccagggacctggccagtgtgagctatgaggagttgggtccgctgccggccggc
tgggaggtgaggagcacggtgtcgggacggatctactttgtggatcacaacaaccgaaca
acgcagttcactgaccccggctacacaccatcatcaggtacacttgtacacacacaccaa
cactcccaggtgaaggattcgtctcagccactgggtgggggaggcgggagagagatggag
gtggggggggaggagggaggagaaggggaggtgacactgcgttatgagagagacctggtc
cacaaactgaagctgctccgacacgagctgtcactacagcaaccacaggccggacactgt
cgcatagaggtctcacgagacgagatctttgaggagtcttatcgtcagatcatgaagatg
agacccaaggatctgaagaaacgactgatggtgaagtttagaggagaggaaggactggac
tacggaggagtggcaagggagtggctgtacctgctgtgccatgagatgttgaacccgttc
cacggcctgttccagtactcaacagacaacatttacacactacagatcaaccctgactcc
tctatcaaccctgaccacctgtcgtatttccactttgtgggtcgtgtgatgggcctggca
gtgttccatagtcactatatcaacggaggcttcaccctgcccttctacaagcagctgctg
gggaaacctattatgctacaagacctggagaccactgatcctgaacttcacaagagtctg
gtctggatactggagaatgacatctcgtcggttctagatcatacgttctgcgtggaacac
agtgccttcgggaagttccttcaacatgagctgaaacccaacggtcagaacctcccggta
accgaggacaacaagaaggagtacgtgaagctttatgtcacctggaggtttatgaggggg
atcgaggctcagttcttagctctgcagaaaggattcagccaactgattcctcaacacctc
ctcaaaccatttgaccacaaggagctggagttgataatcggaggcctggggaagatagac
ctagcagattggaagtctaacacccgtttgaagcactgtgctgtagacagtaatgtggtt
tgctggttctgggaggctgtagagagcttcactgaggagaggagaggacgactactgcag
tttgttaccggttctaccagagttccactacagggattcaaggcactacagggttcagca
ggcccaaggctgttcaccatccatctgatagaggccaacacagacaacctacccaaggca
cacacatgttttaacagaatagatatccctccctacgagtcgtacgagaaactttatgag
aaactgctgacggccgtggaggaaacttgcggcttcgctgtggagtga
DBGET
integrated database retrieval system
