Oncorhynchus tshawytscha (Chinook salmon): 121844557
Help
Entry
121844557 CDS
T05605
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04517
IgSF CAM signaling
otw04530
Tight junction
otw04810
Regulation of actin cytoskeleton
otw05100
Bacterial invasion of epithelial cells
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121844557
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121844557
09144 Cellular community - eukaryotes
04530 Tight junction
121844557
09142 Cell motility
04810 Regulation of actin cytoskeleton
121844557
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121844557
05100 Bacterial invasion of epithelial cells
121844557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121844557
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
121844557
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Arp2/3 complex
121844557
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
121844557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
eIF2A
PEP5_VPS11_N
Rax2
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
EIF3I
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
121844557
NCBI-ProteinID:
XP_042170730
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MAYHSFLLEPISCHSWNKDRTQIALCPNNHDVHIYKKDGTKWTKIHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWSLKGEVWKPTLVILRINRAARCVSWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTVWGSKMPFGEVLFESGPSGVSGGAGEGAGGGWVHGVCFSHSGNRLAWTSHDSTVAIA
EGGKTSTISSLSSETLPLLCVSFITENSLVAAGHDCYPVLFVYDGTKGSVTFGGKLDVPK
QTSQRGISARERFQNLDRRATSSETTEQGLESLHKNSISQISVLEGGKSKCSTFCTTGMD
GGMVTWDVKSLESALKGLKIV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccacagcttcctgctcgaaccaatcagctgccactcctggaacaaggaccgg
acccagattgctctgtgtcccaacaaccatgatgtccacatctataagaaggacgggacc
aagtggaccaagattcatgaactgaaggagcacaacggacaggtcacaggtatagactgg
gctccagagagtaaccgtatcgtgacctgtgggacggatcgtaacgcgtatgtctggtct
ctgaagggggaggtgtggaagcccaccctggtcatcctccgtatcaaccgggctgctcgc
tgtgtcagctggtctcccaaggagaacaagttcgctgtgggcagcgggtcacgcctcata
tccatctgctactttgaacaggagaatgactggtgggtctgtaagcacatcaagaagccg
atccgttccaccgtcctcagtctggactggcatcctaacaacgttctgctggcggctgga
tcctgtgacttcaaatgcagggttttctcggcctacatcaaggaggtggaggagaagccc
ggccccacagtgtgggggtccaagatgccctttggagaggtgctgtttgagtctgggccc
tcaggggtgtctgggggggctggagagggggcaggaggaggatgggtccacggggtctgt
ttctcccacagcgggaaccgcctggcctggacgtcacatgactcgactgtggcgatcgca
gagggaggcaagaccagcacgatcagcagtctgagctctgagacccttcctctgctgtgt
gtcagctttatcactgagaacagcctggtggccgctggtcatgactgctacccggtgctg
tttgtgtatgacggtactaagggctcagtaacgttcggagggaagctggacgttcccaag
cagacgtctcagagagggatcagcgccagggaacgcttccagaacctggaccgccgagcc
acctcgtctgagaccaccgagcagggcctggagagtctgcacaagaacagcatcagtcag
atctctgtgctggagggagggaagagtaaatgttccacgttctgtaccactgggatggac
ggaggaatggtcacatgggacgtcaagagtctggagtctgccctgaagggtctcaagata
gtctga
DBGET
integrated database retrieval system
