Oncorhynchus tshawytscha (Chinook salmon): 121844559
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Entry
121844559 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04517
IgSF CAM signaling
otw04530
Tight junction
otw04810
Regulation of actin cytoskeleton
otw05100
Bacterial invasion of epithelial cells
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121844559
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121844559
09144 Cellular community - eukaryotes
04530 Tight junction
121844559
09142 Cell motility
04810 Regulation of actin cytoskeleton
121844559
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121844559
05100 Bacterial invasion of epithelial cells
121844559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121844559
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
121844559
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Arp2/3 complex
121844559
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
121844559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_Gbeta
EIF3I
Rax2
Beta-prop_HPS5
Beta-prop_EIPR1
RMC1_N
Beta-prop_SPT8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
121844559
NCBI-ProteinID:
XP_042170733
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYQKSGNQWVKSHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSLKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESDNDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGXKMPFGAVLAEFGGAGGGGWVHSVSFSSSGNRLAWVSHDSTVTVVDGTKGSTPS
QLKTEFLPLLSVLFISENSVVAAGHDCCPMLFRCDDGGSLTFVSKLDLPKASITRNISAM
ERFRNMDKRATTEDRNTALETLHQNSITQVSIYEGDQSDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgcaccagtttttgcttgagcccatcacctgtcacgcctggaaccgggacaga
acccagatcgccatcagtcccaacaaccatgaggttcacatctatcagaagagcggtaac
cagtgggtgaagagtcatgagctgaaggagcacaatggacacatcacaggtatcgactgg
gctcctaagtccgaccgtatcgtgacgtgtggggcggatcgtaacgcctacgtctggtct
ctgaaggacggcgtctggaagcccaccctggtcatcctgaggatcaacagagctgcgacc
ttcgtcaagtggtctcctctggagaacaagttcgctgtgggcagcggagccagactcata
tccgtctgttacttcgagtctgataacgactggtgggtgagtaagcacatcaagaagccg
atccgttccaccgtcctcagtctggactggcatcctaacaacgtgctgctggcggctgga
tcctgtgacttcaaatgcagggtgttctctgcctacatcaaggaggtggaggagaagccc
ggccccaccccctggggtnccaagatgccgtttggagcggtgctggctgagtttgggggt
gccgggggaggcggatgggtccactctgtgtccttctcctcctctggtaacagactggcc
tgggtctcacacgactccactgttactgtggtggacgggaccaagggatccactccgtct
cagttgaagactgagttcctccctctgctcagtgttctcttcatctctgagaacagcgtg
gtggcagcgggtcatgactgttgtcccatgctgttccgttgtgatgacggagggtccctg
acgtttgtctctaagctggaccttcccaaagcctccatcactagaaacatctccgctatg
gagcgtttcagaaacatggacaagagagcgaccacagaggaccgtaacacagccctggag
acactgcaccagaactccatcactcaggtctctatctatgagggagaccagtctgactgt
cgtaagttctgcaccactggcatcgatggagccatgaccatctgggacttcaagagtctg
gaggcgtccatccaggggctgaggatcatgtga
DBGET
integrated database retrieval system
