Oncorhynchus tshawytscha (Chinook salmon): 121844576
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Entry
121844576 CDS
T05605
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A-like
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121844576
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121844576
04082 Neuroactive ligand signaling
121844576
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
121844576
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glutamate (ionotropic)
121844576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
121844576
NCBI-ProteinID:
XP_042170778
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MKNVTWEGRDLSFTEDGYQQNPKLVVIVLNKEREWEKMGRLDNRSLTLKYHVWPRFNSFG
DAETDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGGTYIKKCCK
GFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVGSLTINEE
RSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSATVWIMMFVMLLLVTAMAVFMFE
YISPLGFNRNLAQGRDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFIVSVWAFF
AVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGSTERNIRKN
YPNMHEYLSKYHQTGVQDALVSLKTGKLDAFIYDAAVLNYAAGRDEGCKLVTIGSGYIFA
TTGYGIALHKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHHEKNEVMSSQLDIDNM
AGVFYMLATAMGLSLITFISEHLFYWRLRYCFTGVCTGTPGLLFSISRGIWSCIHGVHID
MKKKSELDFSPQANMLKLIKSAKQMTNMSNLSASRINSPKRAAEFMHSAGPMIMDMMAEK
GNFIYADNRSYAPKEVIYGDTGDLQAYLANRHKDHLNNYIFQGGQHPLTLNESNPNSVEV
AVSADAAQTNAKPRGLWKKSVDTMRQGPGVPGPDMLSPDPRISMKTQRYLPEEAAHSDIS
DCSSRGGGGSYQDPENNKHLKNKDGLKKRQLPSKYPRDCSEVELSYLKTKQGSGGGGGVG
GQGQGQIYTIDSDRELNLNSDPLHYRESRGLAADDLDYPEIYSDHNDNYRKCQDQPIIHL
NSSPLHHADVDLLPDSTYSKHYGVKDKSLSLSPHETNDRSKQTHCRSCLSKFPASSSYTP
GHYTAAAARSPYNRCEACLHTANLYDISEDQLLQDALLTNQGMHQHQDEMFGHYWPQTDG
PHVQKRNRLRMSRQHSFDNIMLEKPKEIDLGRPARSVSLKEKDRCFLDDSPYANLFSVRQ
ADKLLGSRSMLFNLEENKRSKSLYPEHGSDNPFMASSLRDDTRLVHGRSSSDIYKQLGGG
GLKTSQRNENNLRSSVKSAASYCSRDGGRIPANDMYITEHVMPYVANKTSSYSAAPRGVL
NSAQFSNRRVYKKIPSLESDV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgtaacatgggaaggtagagacttgtcgtttacagaagacggttaccagcag
aaccccaagctggtcgtcatcgttctcaataaggaacgagaatgggagaagatgggtcgt
ttggacaaccgtagcctgacgttgaagtaccacgtgtggccgcgcttcaactcgttcggc
gacgcggagacggatgacaaccatctgtccatcgtgactctggaggagaaacccttcgtc
atcgtggaagacgtggagaggctcactggaacctgtatgaggaattctgttccctgtagg
aagcacatcaaggacaacaccacagaggcgggcgggacctacattaaaaagtgctgtaaa
ggattctgcatcgacatcctgaagaagatcgcgaagtacgtaaagttcacctacgatctc
tacctggttaccaacggtaaacacgggaagaagatcaacaacgtgtggaacgggatggtg
ggagaggtggtctataagaaagctgtcatggccgtcggctctctgacgatcaatgaggag
cgttctgaggtcatcgatttctccgtcccgttcgtggaaactggaataagcgtcatggtc
tcccgtagcaacggaaccgtctccccgtccgcctttcttgagccgttcagtgcgacggtg
tggatcatgatgtttgtgatgctgttgttggtaacagcaatggctgtgttcatgtttgaa
tacatcagccctctgggctttaacaggaacctggcacagggtagagacccccacggccca
tcgttcactatgggtaaggcggtgtggctgctgtggggtctggtgttcaacaactctgtc
ccggttcagaaccctaaaggcaccaccagtaagttcatagtgtcggtgtgggccttcttc
gccgtcatcttcctggcctcttacacagccaacctggctgccttcatgatccaggaggag
tttgtagaccaggtcacgggactgtctgacaacaagttccagaacccgtatgcgtactcc
cctccgttccgttttgggacggtccccaacggttcgacggagaggaacatcaggaagaat
taccctaacatgcacgagtacctgtccaagtaccaccagacaggggttcaggacgctctg
gtcagcctgaagacgggtaaactggatgccttcatctacgatgctgctgtgttgaactat
gcagcgggtcgagacgagggctgtaagctggtcaccatcggcagtgggtacatcttcgcc
accaccggctacggcatcgctctgcataaagggtcctactggaaacgccaggtggacctg
gctatactggctattataggagacggtgagatggaggagctggaagctcagtggctaacg
gggatctgtcaccatgagaagaacgaggtgatgtccagtcagctggacatcgacaacatg
gccggagtgttttacatgctggctaccgcaatgggactgtctctcattaccttcatatca
gagcatctcttctactggaggttgagatactgtttcactggagtctgtacgggaacaccg
ggactactgttctctataagcagggggatttggagttgtattcacggcgtccacatcgac
atgaaaaagaaatccgagctggattttagccctcaggccaacatgttgaagctcatcaag
tcagccaaacagatgaccaacatgtccaacctgtctgcgtccaggatcaattcccccaag
cgggcggctgagttcatgcactcggcggggcccatgatcatggatatgatggctgagaaa
ggtaacttcatctacgccgacaatcgaagctacgcccctaaagaggtgatctacggcgat
acgggcgacctccaggcgtacctggccaaccgacacaaagaccacctgaataactacatc
ttccaaggcggacagcaccctctgaccctcaacgagtcaaacccaaactccgtggaagtg
gcggtgagcgcggacgccgcccagaccaacgccaaacccagaggcctgtggaagaagtcc
gtggacacaatgcggcagggtccaggtgtcccgggccccgacatgctgtcccccgacccc
cgcatctccatgaagacgcaacgataccttccggaggaagcagctcactcagacatctct
gactgctccagccgaggaggaggcggttcgtaccaggacccagaaaacaacaagcacctg
aagaacaaggacggattaaaaaaaagacagttgccgtcgaaataccctagggactgcagc
gaagtagagctgtcctacttaaagactaagcagggcagcggagggggtggaggagtggga
ggacagggacaaggacagatctacaccatagactcagatagagaactcaatctcaactct
gatcctttacactaccgcgagagtcgaggcctggccgccgacgacctggactacccagag
atctactctgaccacaacgacaactaccggaagtgtcaggatcagccaatcatccacctc
aactcgtccccactgcaccacgccgacgtcgacctgctcccggactcgacttactccaaa
cactacggtgtgaaggataagagcttgtccctgtcgccccacgagaccaatgaccgttcc
aaacagacccattgccgctcttgtctgtccaagttccctgccagtagcagctacaccccg
ggtcactacaccgccgccgccgcccgctcgccctacaaccgctgcgaagcgtgcctccac
actgctaacctctacgacatcagcgaagaccagctgctccaggacgccctgctgaccaac
cagggaatgcatcaacatcaggacgagatgttcggccactactggcctcagacggacggt
ccgcacgtccagaagagaaaccggctgcgtatgtcccgccaacactcgttcgacaacatc
atgctggagaagcctaaagaaatagatctggggcgtccggctcgctccgtcagcctcaaa
gagaaagaccgctgcttcctggatgattctccctacgccaacctgttcagcgtccgccag
gccgacaagctgttgggctccaggtcgatgctgttcaacctggaggagaacaaacggagc
aagtcgctgtaccccgaacacggctctgacaaccccttcatggcgtcttcgctgagggac
gacacgcgcctcgtccacggacgcagctcctccgacatttacaaacagctgggaggagga
gggctcaaaacatcgcaacgcaacgaaaacaatctgagatcctcggtcaaatccgccgct
tcctactgctcccgggacggaggacggataccagccaatgacatgtacattacagagcat
gtgatgccttatgtagccaataagacaagttcttactcagccgcaccgcgaggggtacta
aactcagcccagttcagcaatagacgggtttataagaagatacccagtctggagtcagac
gtttaa
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