Oncorhynchus tshawytscha (Chinook salmon): 121844602
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Entry
121844602 CDS
T05605
Name
(RefSeq) putative RNA-binding protein 15B
KO
K13190
RNA-binding protein 15
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
121844602
03041 Spliceosome [BR:
otw03041
]
121844602
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
121844602
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121844602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121844602
NCBI-ProteinID:
XP_042170813
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MKRQAGRDSSPSRTLTKRIRERERDRDGARREDLPLPPLALLLAETGRQHARSRSREREK
TRLREERGGTGDPLHHRQQHHDLDLLGRPSLRTTAVLPKGKAAAELLGLRGGAGGTLEYK
SLLISNLGSVLSDEHVEDGLFHEFKKFGDVSVKLSHTPELGRVAYINFRHPEDAKEARHA
KTRLVLYDRPLKVEPMYVRRRSCTPPDMGYVPIHGAPYPSYRQRSLSPCPGVSSIRDIRP
PRHYHVEGLGLSRERERILDYYGMLEERGRLYGLPVPEHDDIKPEDDARACRNLFIGNLD
HNVTEGELRRGFDKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKITMQGRVIGGN
PVKIGYGKANPTTRLWVGGLGPSNSLAALAREFDRFGSIRNIHYAKGDSFAYIQYESLDA
SQAACTQMRGFPLGGPERRLRVDFAKAEEPLPRSYPTGYQPPVSQPAHLDLLRHRDRSLE
RELRSRERSPPSHALFTQRERERLLDRGDREFISPTNSLERRGSEAFGVSRGGRGDRAAR
SRSRERWLKERDAERAGAERRRHRSLSLDGPSQEKERGMSKVRGEAGPASPEDSPDRARV
RAPDSTTEPRGQSPDSSRHSNEDRAGQDGHETASSRDRHKKTGGDREKDRDRNHRASDTN
HTSDTVKKDPRTPSTLSECATTLTKAWHGHFTLKNSCFPTNMHLLEGGSGFFHSVMKDHQ
AKGKLTQLKIAQRLRMDKTRLNEVTRRIKHGGSEGYAVLLALQGPIDRESPPPEAGLQIR
LLRHLVTYLRNKEAAGVISLPVGGAKEGGKGGMLYAFPPCDFSQQLLQSAHRTLGNLDEE
HLVVVIVNDSA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacaggccgggagggactccagtcctagtaggactttaacgaaacgaatccgg
gaaagagagcgggaccgggacggggcacggagagaggacctgccgctcccaccacttgct
ttgctgctcgctgaaaccgggaggcaacatgctcggagtaggagcagggaacgagaaaag
acacggcttcgggaggagcgtggaggcaccggagaccccctccaccaccgacaacaacac
cacgacctcgatctcctcggccgaccctctctccggactacagccgtcctgcctaaaggc
aaagcggcagccgaactactgggcctccgggggggagccggtgggactctggaatacaaa
tcgttgctcattagcaatctcggctcggtgctttctgacgagcacgttgaagacggactg
tttcacgagtttaaaaagtttggtgacgttagtgtgaaactatctcacactccagaacta
ggccgagtcgcctacatcaatttccggcacccggaggacgctaaagaggccaggcatgcc
aaaaccaggctagtactctatgaccgccctctcaaagtagagcccatgtacgtccggcgg
cgcagctgcacgccgccggatatgggctatgtccctatccatggcgccccatatccctct
tatagacagaggtccctctccccctgccctggagttagtagtatcagagatatccgacca
ccaagacattaccatgtagagggactgggactgagcagagagagggagaggatcttagat
tactatgggatgttagaggagaggggaaggctatacgggctgcctgtacctgagcatgat
gacataaaacctgaggacgacgcgagggcgtgcaggaacctgttcatcggcaacctggat
cacaacgtcaccgagggcgagctgaggagaggcttcgataagtacggcatcattgaggaa
gttgtgattaaacgaccggcgcgcggtcagggtggagcctacgctttcctcaagttccaa
aacttagacatggctcaccgggctaagataaccatgcagggtcgcgtgattggcgggaac
ccggtgaagataggctacggtaaggccaacccaaccaccagactctgggtaggtgggctg
ggacccagcaattccctggcagccctggccagagagtttgaccgttttggcagcattcgg
aacatacactatgcgaaaggggatagttttgcctacattcagtatgagagcctagatgcc
tctcaggctgcatgcactcagatgagagggttccctctaggaggcccagagaggaggctg
agggtggactttgccaaggctgaggagcccctgcctcgtagttacccaacaggataccag
ccccctgtgtcccagcctgcccacctggacctgctgaggcatcgcgaccgtagcctggag
agagagctacgctcccgggaacgctcgcccccctcccacgccctgttcactcagcgggag
agagagagactgctggacaggggggacagagagttcatctctccaacaaatagccttgag
cgcagggggagtgaagcttttggggtgtctcgtggtggccgaggggaccgggcagcccgg
agccgaagcagagagcgctggctgaaggagagagacgcagagcgggctggggcggagaga
cgcagacacaggtccctttcccttgatggaccctctcaggagaaggagagaggcatgtcc
aaggtgagaggagaagcagggccagcttctccagaagacagcccagacagagccagggtc
cgggccccagactctaccaccgagcccaggggacagagccccgacagcagccgccactcc
aacgaggaccgggccggccaggacggccacgaaacagcctccagccgggaccgtcacaag
aagactggcggggacagagagaaggaccgtgaccgcaaccaccgtgccagcgacacaaac
cacacctcagacacagttaagaaagaccccagaacacccagtacgctgtcggagtgtgcc
accaccctcaccaaagcctggcacggtcacttcaccctgaagaactcctgtttccccact
aacatgcacctgttagagggaggctccgggttcttccactctgtcatgaaggaccaccag
gccaaggggaaactgacccagctgaagatcgcccagcgactgaggatggacaagaccagg
ttgaacgaggtcaccaggaggatcaagcatggtggctccgagggctacgctgttctcctg
gccctccagggccccatcgaccgcgagtcccctccacctgaagcaggcctacagatcaga
ctcctccgtcacctggtcacctacctgaggaacaaagaggctgccggagtgatcagtcta
cctgtaggtggggctaaggagggaggaaaggggggcatgctgtacgccttccccccatgt
gacttctcccagcagttactccagagtgcacacaggactttggggaatctggatgaagag
cacctggtggttgttattgtcaatgactctgcctaa
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