Oncorhynchus tshawytscha (Chinook salmon): 121844979
Help
Entry
121844979 CDS
T05605
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
121844979
Enzymes [BR:
otw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
121844979
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121844979
Prokaryotic type
121844979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
121844979
NCBI-ProteinID:
XP_042171508
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MAGSVTGVAVPKHSLSKLQSLNGLFAIYKKEGPTSADVLNSLKETLLKEAGVKDPNPRKR
KKQALKMGHGGTLDSAASGVLVVGIGNGTKMLSTMLAGSKKYMAVGELGKATDTLDATGK
VVHEKLYDHITREAFEEKLKQFTGDIMQVPPLYSALKKDGKRLSVLLKQGHEVEAKPARP
VTVYNLSLQDFTPPLFTLDVECGGGFYIRSLVDDLGKALSSCAHVRKLIRTKQGQFTLDD
HTLQEEHWTLQHIVQSMQPCPGSEVTKEDGTKPSPNLGVKRALNAQVKGDKNGKDEKGEL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggctggttcagtaactggcgtagctgtgcctaaacattctttatcaaaactacaatct
ttaaatggactttttgccatttataaaaaggaaggacctacgtctgctgatgttttaaac
tcattaaaagagacactcctcaaagaggccggtgtgaaagatcctaatcccagaaaaagg
aagaagcaagctctgaaaatggggcatggcgggactctggacagcgcagcctctggtgtg
ctcgttgttgggattggaaatggaacaaagatgcttagtactatgcttgctggttcaaag
aaatacatggctgttggagagttgggaaaagcaacagacacccttgacgccacaggcaag
gtggttcatgagaagctctatgatcacattaccagggaagcctttgaggagaagttgaag
cagttcactggggacatcatgcaggttcctccactgtactctgcactgaagaaggatggc
aagcgtctttctgtcctgctgaagcaaggccacgaggtggaagccaaacctgcacggccg
gtcacagtgtataacctgtcgctgcaggacttcactccccccctcttcactcttgatgtt
gaatgcggtggtggattttatatcagaagcttggtggacgacctgggaaaagcgctctcg
tcgtgtgcccacgtgaggaagctgatccggaccaaacagggtcagtttacccttgacgac
cacacgctgcaggaggaacactggacactacaacacatcgttcagtccatgcagccctgt
cccgggtcagaggtcaccaaggaggatggcacaaagccaagcccaaacctgggggttaaa
cgggccctgaatgcccaggtgaagggggataagaatggcaaagatgaaaagggggagtta
taa
DBGET
integrated database retrieval system
