Oncorhynchus tshawytscha (Chinook salmon): 121845050
Help
Entry
121845050 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein SYDE1-like
KO
K20655
Rho GTPase-activating protein SYDE
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121845050
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121845050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
121845050
NCBI-ProteinID:
XP_042171689
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
KDNHLCSRSTSLYLQRRTERRNVLPKEARAAVLPKEARDCPTEGGSRLSYQRRLETALPK
EAPDCPTEGGSAVLGGSRLSYRRRLETVLPKEARGCPTEGGSRLPYRRRLETVLPKEARG
CPTEGGSRLPYRRRLETVLPKEARDCPTEGGSRLSYRRRLAAVLPKEARGYIQRKSDVIQ
SASSSSLSTVTTEEAEPPTLPPEDSTTTPRTQITVAKKQQWAKLASTPGTEGSHSLLYGA
CDSDSSSGKAQVSTAKQAWSQKTLVEAGLDRRRCDDLDWEHQGQCSTSFCEPPPPVHTAV
PEFTNPIGGYAEICVSSCMVKSSGSGAYLQTLDRSSRAWVLSTGKSQAADESYSRLGLPP
NCFAELRQRTEGDNNIWWRRGVSSSGGGVSVPSDSPGAQKKGGVASSMMDRIKSPGMVRK
SLSMKMKKLPELRRKLSLRSSRSHRHGKEGTGRGGGDGGGEGTSPPDVRKEQSNEVISRY
HLDTSAPARPQRRSSRGRSSAASKGGYLSDGDSPELLPKQGGPGDPPRPTTPSSTTPLHP
PLHSFRVYNLSDQPRCAQRVSGLLTVHLVGVEKLLRAPKQDASKEVFCAIQVDGVTRART
GLLTSRGGSLPLNHTFNLELERARLLKLVVLTPYPGAETTTMKGSDSTAATRNRVCCLGA
VSIPPLFKASRSQQIFLEPRGLLXLTLLEQWEPLPPTLXTSTPMVFGVELRHLVDKENTA
APPLLIQKSVAEIQKRGLRVVGLYRLCGSAAVKKELRDAFERDSAAVSLNEEVYPDINVI
TGILKDYLRELPSSLITRTLYEVVLEAMSLRPPPSRSSPGTSSPGRSEGDEQRSQSTVAL
LQCLPEPERATLSLLLDHLSLVASYSDCNRMNCQNLAVCFGPVLLTPTQESWRPTAPGQG
GQGGRGGSCGRGGRSFAHSEEIASAVDFKRHIEALHYLLQLWPIPPDRVTDNPDSPTLLQ
PSSSSDTPPSPPRPMPHNPLPRRCQRGLSLPLDLPGDEVGVVSRRGRGRLESPPCNRYAG
DWSVCGRDFLSGGDADYDEVAGSDSEEEEEEREVKKVEWTQYVDDLVLDFDAPFTCRLSL
KDFDTLISDLERELSKQINICL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
aaggacaaccatctctgcagccgctccaccagcctttatctgcagagaagaacggagaga
agaaacgtcttaccgaaggaggctcgcgcggctgtcctaccgaaggaggctcgagactgt
cctaccgaaggaggctcgcggctgtcctaccaaaggaggctcgagactgccctaccgaag
gaagctccagactgtcctaccgaaggaggctcggctgtcctaggaggctcgagactgtcc
taccgaaggaggctcgagactgtcctaccgaaggaggctcgcggctgtcctaccgaagga
ggctcgagactgccctaccgaaggaggctcgagactgtcctaccgaaggaggctcgcggc
tgtcctaccgaaggaggctcgagactgccctaccgaaggaggctcgagactgtcctaccg
aaggaggctcgagactgtcctaccgaaggaggctcgcggctgtcctaccgaaggaggctc
gcggctgtcctaccgaaggaggctcgcggctacatccagcggaagagtgatgtcatccaa
agcgcttcatcctcatcgttgtcaacggtaacgacagaggaggctgaacccccgaccctt
ccaccggaggacagcaccaccaccccacgcacccagataacagtggccaagaaacagcag
tgggccaaactggcctccacaccaggcacagagggctctcacagcctgctctacggggct
tgtgactcggatagcagctcaggaaaggcccaggtctcaaccgccaaacaggcctggagc
cagaagacgttagtggaggccgggctggacaggaggaggtgtgatgatttagactgggag
catcagggacaatgtagcacctccttctgtgagcctcctccccctgtccacaccgcagtc
ccagagttcaccaaccctataggaggttacgctgagatctgtgtctcctcctgtatggtg
aagtcctcggggtcaggggcctatctccagaccctggacaggagcagccgagcctgggta
ctgtccacaggaaagagccaggctgccgacgagtcctactcgcgtctaggcctccccccc
aactgcttcgctgagctgaggcaacgcacagaaggggacaacaacatttggtggagaagg
ggtgtttccagctccggaggaggtgtgtcagtcccctcagacagccccggtgcccagaag
aaagggggcgtggccagcagcatgatggacaggatcaaatccccaggaatggtccggaaa
tccctttccatgaagatgaagaagctccccgaactccgccgtaaactcagcctgcgctcc
tctcgctcccatcgccacgggaaggaggggacgggccgaggaggaggggacgggggtgga
gaggggacatcacccccagacgtccgtaaggagcagtccaacgaggtgatcagcaggtac
cacctggacacttcggccccggcgagaccacaacgacgctcctccaggggacgctcctct
gccgccagtaaggggggctacctgagcgacggagattcacctgagctgctgcccaaacag
ggtggaccaggggaccctcctcggcccacaaccccctcttccaccaccccgctccaccca
ccactccactcgttcagagtctacaacttgtcggaccagccacggtgcgcccagcgcgtc
tccggcctgctcacggtgcatctcgttggggtggagaaactgctgagggcccctaaacag
gacgccagtaaggaggtgttctgtgccatccaggtggatggtgtaaccagggcccgtacc
ggcctgctaacctccagggggggctctctgcccctcaaccacaccttcaacctggagctg
gagagggccaggctgctgaaactggtggtgctcaccccttaccccggggctgagactacc
accatgaagggcagcgactccacagcagcgaccaggaacagggtctgctgtctgggggct
gtgtccataccccctctgttcaaagcctctcggtctcagcagatattcttagagcccagg
ggtctactgnntctgaccctgctggagcagtgggagccccttcccccgaccctgnccacc
tcaacccccatggtgtttggagtggagctgcgccacctggtggacaaggagaacaccgct
gccccccctctgctcatacagaagagtgtggctgagatccagaagagaggactgagggtg
gtgggtctgtaccgtctgtgtggttcagctgcagtgaagaaggaactgagagacgcgttt
gagagggacagtgctgctgtcagcctgaatgaagaggtttatcctgacatcaacgtcatc
acaggcattctgaaggactacctacgtgagctgccgtcctcccttatcaccaggaccttg
tacgaggtagttttggaggccatgtctctgagacctcctccttctcgctcctcccctgga
acctcctctcctggcaggagcgagggagacgaacagcgctctcagagcaccgtggcccta
ctgcaatgtctgcctgaaccagagagggccaccctctctctgctcctggaccatctgagc
ctcgttgcctcctacagtgactgtaaccgaatgaactgtcagaacctggctgtgtgtttc
ggcccggtgctcctgacccccacccaggagtcctggagacccactgcaccaggacagggc
gggcagggcgggcgcggggggagctgtggaaggggcggacggagttttgctcacagcgag
gagatcgccagtgctgtggacttcaagagacacatcgaggccttgcattacctgttgcag
ctctggcccattcctccagacagagtgacagacaaccccgactctcccaccctcctccag
ccctcctccagttcagacacgcctccttcccctcccagacccatgccccataaccccctg
cctcggcgctgccagcgtggcctgtcgctgcctctggacctcccgggggacgaagtgggc
gtggtctcgcgacgtggacggggccgactggagagcccgccctgtaaccggtatgctggc
gactggagcgtgtgtgggcgggacttcctgtccggaggcgatgcggactacgacgaggtg
gcagggagcgacagtgaggaagaggaggaagagagggaggtgaagaaggtggagtggact
cagtacgtagacgacttagttctggactttgacgccccgtttacctgcagactgagtctc
aaagactttgatacgctgatatcagacctggagagagagctgtccaaacagattaacatc
tgtctctga
DBGET
integrated database retrieval system
