Oncorhynchus tshawytscha (Chinook salmon): 121845220
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Entry
121845220 CDS
T05605
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121845220
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121845220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
121845220
03009 Ribosome biogenesis [BR:
otw03009
]
121845220
04131 Membrane trafficking [BR:
otw04131
]
121845220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
121845220
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121845220
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
121845220
Membrane trafficking [BR:
otw04131
]
SNARE
SNARE associated proteins
Others
121845220
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121845220
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121845220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_22
AAA_33
AAA_2
TIP49
AAA_14
RNA_helicase
AAA_28
AAA_18
nSTAND3
AAA_17
ATPase
Mg_chelatase
Vps4_C
Parvo_NS1
ATPase_2
IstB_IS21
AAA_7
ResIII
AAA_24
ABC_tran
Bac_DnaA
SLFN-g3_helicase
Zeta_toxin
Viral_helicase1
Sigma54_activat
TsaE
NACHT
DUF815
NB-ARC
Rad17
KAP_NTPase
bpMoxR
Zot
Motif
Other DBs
NCBI-GeneID:
121845220
NCBI-ProteinID:
XP_042172029
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MPASGGTDPKGEDFSTAILKQKHRPNRLVVDEAHNEDNSIVSLSQAKTEELQLFRGDTVV
LRGRKRRETVCIVLTDDTCPDERVRMNRVTRNNLRVRLGDVISVHACPDVKYGVRIHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPAPHCIVAP
DTVIHCEGQPINREDEEESLTDVGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP
AIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRTHVIVMAATNRPNSIDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLSDDVDLERVSMDAHGHVGSDLAALCSEA
ALQAIRKKMTLIDLEDDTIDAELLNSLAVTNDDFRWALGQSNPSALRETVVEVPNVNWED
IGGLGEVRELQNLSQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANF
ISIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAADR
VINQILTEMDGMSNKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDTASRTAILNA
NLRKSPIARDVDLAYLSGITQGFSGADLTEICQRACKLAIREAIEAEIKAERQRQTHPGT
AMDEDCDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSGSQS
GGQGSGSGGQFRDEVEDDLYQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctctggaggaacagatcctaaaggggaggatttctccactgctatcctgaag
cagaaacacagacccaatagactggtggtggatgaagcccacaatgaagacaacagcatc
gtcagcctctcacaggcgaagacagaggagctgcagttgttccgtggcgacacggttgtc
ctgcgggggaggaagcggcgtgagacggtgtgtatcgtgttgacagacgacacctgtcca
gacgaacgcgtccgcatgaaccgcgtcacacgcaacaacctgcgggtacgcctcggtgat
gtcatcagtgtccatgcatgcccagatgtgaagtacggcgtgcgtatccatgtcctgccg
atagatgacaccattgaagggttaacgggaaacctgttcgacgtcttcctgaaaccctat
ttcttggaagcctatcggcctgtacacaaaggcgacatcttcctggtgcgagggggcatg
cgggctgtggagttcaaggtggtggagacagaccccgccccccactgcatcgtcgccccg
gataccgtcatccactgcgagggacagccaatcaacagagaggacgaggaggagagtctg
actgacgtaggctatgatgacattggaggttgtcgtaaacagttagctcaaatcaaagaa
atggtggagcttcccctcagacatcctggactattcaaggctataggagtcaagcctccc
aggggtattctgctgtatggacctccaggtacagggaagacactggttgcccgggccgtc
gccaacgagactggagcattcttcttcctcatcaatggtcctgagatcatgagtaagatg
gccggggagtcagagagcaacctgaggaaagccttcgaggaggcagagaaaaactctccc
gccattattttcatagacgaactggattctatcgctcctaagagagagaagacccatggg
gaggtggagaggcgtatcgtatcacagctcctcaccctgatggatggactgaagcagaga
actcacgttatcgtcatggcagccaccaacagacccaacagcatcgaccctgccctgaga
cgcttcggcaggtttgacagagagatcgacatcggcatcccagactccactggtagactg
gagatactgcagattcacaccaagaacatgaagctatctgacgacgtggacctggagagg
gtttccatggatgcgcatggccatgtggggtcagatctggcagctctgtgttctgaggcg
gctctgcaggccatcaggaagaagatgaccctgattgacctggaggacgacaccattgat
gctgaactgctcaactcactggcagttaccaacgatgacttcaggtgggcgttggggcag
agtaacccgtcagctctgagggagacagtagtggaggttcctaatgttaactgggaggat
ataggaggactgggagaggtcagagaactgcagaatctctcccagtacccggtggagtac
ccagataagttcctgaagttcggtatgaccccgtcacgaggagtgttattctatggaccc
ccaggctgtggaaagaccctgctagccaaggcgattgctaacgagtgccaggccaacttc
atctccatcaagggacctgaactgctcaccatgtggttcggcgagtcagaggctaatgtc
agggacgtcttcgacaaggccagacaggcggccccctgcatactgttctttgacgagctg
gactccattgccaagtccagagggggcggagccggggacgcagggggcgcagccgacagg
gtcatcaaccagatcctcacggagatggacggaatgtccaacaagaagaacgtctttatt
ataggagctaccaacagacctgatataatagactctgctatcctccgtccagggaggctg
gatcagctcatctacatccctctaccagacacagcctcccgtaccgccatcctcaacgca
aacctacgcaagtcccccatcgccagagatgtagacctggcctacctgtctggtatcacc
cagggtttcagtggggcagacctgacagagatctgccagagggcctgtaagctggccatc
agagaggccatagaggctgagatcaaagcagagcgccagagacagacccacccaggcacc
gccatggatgaggactgtgaccctgttccagagatcaggaaggatcactttgaagaggcc
atgaggttcgcccggcgctccgtcagcgacaacgatatcaggaagtatgagatgttcgcc
cagacactacagcagagcagaggctttgggaacttcaggttcccctctggctctcagtcc
ggaggtcaagggtcggggtcaggggggcagttcagagacgaggtagaggacgacctctac
cagtga
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integrated database retrieval system
