Oncorhynchus tshawytscha (Chinook salmon): 121845336
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Entry
121845336 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor-interacting protein 1-like
KO
K20251
glutamate receptor-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121845336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121845336
Membrane trafficking [BR:
otw04131
]
Protein recycling
Others
Glutamate receptor-interacting proteins (GRIPs)
121845336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
EutA
Motif
Other DBs
NCBI-GeneID:
121845336
NCBI-ProteinID:
XP_042172415
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MKNSHIADSCYKSDEEDEGPYTKHSNPSRPPDGALAIRRQSIPDEFKGSSVVELMKKEGT
TLGLTVSGGVDKDGKPRVSNLRQGGIAARSDQLNVGDYIKSVNGINLTKFRHDEIISLLK
NVGERVVLEVEFELPPVSVQGSGLMFKSVEVTLHKEGNTFGFVIRGGAHEDRNKSRPVVI
TTIRPGGPADREGTVKPGDRLLSIDGIRLHGTSHAEAMSILKQCGQEATLLIEYDVSIMD
SIATASGPLLVEVAKSLGSSLGLALNTSMYCNKQVIIIDKVKPASIADRCGALHAGDHIL
SVDGTSMEYCTLAEATQLLASACEHVKMEILPHHQTRLALKGPEHVKVQRSTRTLPWESS
SANNNSNFLPYQHYNTYHPDQSQRHQASKHHKTSPNNPPLGSSFSPTSMSTYSLSSLNMS
TLPRNMYPTSPRGTMIRRKLKKKDFKSSLSLASSTLGLAGQVVHTETTEVILVSDSLMGF
GIQLQGGVFATETLSSPPLIGYLDPDSPAERCGILQIGDRILSINGIPTEDSTLEETNQL
LRDSSITSKVSLEIEFDVAESVIPSSGTFHVKLPKKPGVELGITISSPSSRKPGFCKYTN
QPIKKGNLLNRTGTLELGDKLLAIDNIRLDNCSMEDAVQILQQCEELVKLKIRKDEDNSD
EQELSGSIIYTVELKRYGGPLGITISGTEEPFDPIVISSLTKGGLAERTGAIHIGDRILA
INCNSLKGKPLSEAIHLLQMAGESVTLKIKKQGDLASPKLPSVSGHLSDVMLSDVEDEAG
LGGLGNQAESQKHGKLSDLYSTTIPSVDSAVESWDGSAIDTTFNTQAPGFQASGYSFHSH
EWRNAKPSQGSLSPXSTRQRHNVLADLGLSDDEWDRPTAGGFTVGHDGTEPDQEENFWSQ
ALEDLETCGQSGILRELEATIMSGSSLSLNHDPAPLRSHLGRQASFQERSAARPQYNQSS
RSNTLPSDGGRKAFAMRKMKQEMNDVMSPTPXELHKVSLLKESDLEDFGFSVSDGLLEKG
VYVNNIRPGGPAEVGGLKSYDRLLQINHVRTRDFDCCLVVPLIAESGNKLDLVISRNPAS
SRTGSQSELNQLPAEEPVINWTEPGTASLALHRTRTTIPCPGWLLESG
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattctcatattgcagattcctgctacaaaagcgacgaagaagatgaggggcct
tacacaaagcactccaacccctccaggccaccggatggagcgctggccatcaggaggcag
agtatcccagatgagtttaagggctccagtgttgtagagttaatgaagaaagagggaacc
acactcggcctcactgtgtccgggggcgtcgacaaggatggaaaacctcgggtgtccaac
ctgcgccagggaggcatcgctgctaggagtgaccagctcaacgtgggcgactacatcaag
tctgtaaacgggatcaatctgaccaagttccgtcacgacgagatcatcagcctgctgaag
aacgtcggagaacgtgtggttctagaggtggaattcgagctgccacctgtctctgttcaa
ggctctgggctgatgttcaaaagcgttgaggtgactctgcacaaagaaggcaatacgttc
ggctttgtcatccgaggaggagcccacgaggacaggaacaaatcccgccccgttgtcata
acgaccatcaggccaggtggaccggctgacagggagggtacggtgaagccaggggacagg
ctcctgagtatcgatgggatccgtcttcacgggacatcccatgcagaggccatgtccatc
ctcaaacagtgtggacaggaggctacgctactcatcgagtatgacgtctccatcatggac
tccatagccacagcttcagggcctctgctggttgaggtagccaagtccctggggtccagt
ctgggcctggccctcaacacctccatgtactgcaacaagcaggtcatcatcatagacaag
gtcaagcccgcaagcatcgcagacaggtgcggggcgctgcatgcgggtgaccacatcctg
tctgtggacggtaccagtatggagtactgtaccttggccgaggccacccagctgctcgcc
agcgcctgtgaacacgtcaagatggagatcctgccccaccaccagaccaggctggccctc
aagggtcctgaacacgtcaaggtgcagagaagcacgcggacccttccctgggagtcctcc
tcagccaacaacaacagcaacttcctcccctaccagcactataacacctaccatcctgac
cagtcgcagagacaccaggcctccaagcaccacaaaacctctcccaacaacccccctcta
ggctcctccttctctcctacctctatgagtacctacagtctgagctccctcaacatgagc
accctgcccaggaacatgtaccccaccagccccagaggaaccatgatcaggaggaaactc
aaaaagaaggacttcaagagctcactgtctctggctagcagtaccctgggtctagcaggt
caggttgttcacactgagacgactgaggtgattctggtcagtgactctctcatggggttt
ggcatccagctacagggcggggtgtttgccacagagaccctgtcctcacccccgctcatc
ggctatttggatccagacagtcctgcagagaggtgtgggattttgcagataggtgaccgt
atcctgtctataaacgggatccctacagaggacagcaccttggaagagaccaatcagcta
ctgagagactccagcatcaccagcaaggtctcgctggagatagagtttgatgtggcagag
tcagtcatccctagcagtggcaccttccatgtgaagctaccaaagaagcctggggtggaa
ctggggatcactatcagctctccatccagtaggaaacctgggttttgtaaatacaccaat
cagccaatcaagaagggcaacctgctcaacaggactgggactctggagctgggggacaag
ctgctggccatcgataacatccggctggacaactgctccatggaagacgctgttcagatt
ctccagcagtgtgaagaactggtcaagctcaagatccgcaaggacgaggacaactcagac
gaacaggagctgtctggatccatcatctacacggtggagctgaagagatatggaggcccg
ctggggatcaccatctcaggcacagaggagccctttgaccccatcgtcatctccagcctc
accaagggaggactggcagagaggacgggagcgatccacatcggggacaggatccttgcc
atcaactgtaacagtctgaagggtaaaccactgagtgaagccattcacctgctgcagatg
gctggagagtctgtcacactgaagatcaagaaacagggagacttggccagtcccaagctg
ccgtcggtgtctggtcatctcagtgatgtgatgctgagtgatgtggaggacgaggcaggg
ttaggcgggctgggaaaccaggcagagagccagaaacatgggaagctctctgacctctac
tccaccaccatcccctctgtggactcagccgtggagtcctgggacggttcggccatagac
accaccttcaacacccaggccccaggtttccaggcgtctggctacagcttccacagccat
gagtggaggaacgccaagcccagccaaggcagcctgtccccgntcagcacccgccagaga
cacaacgtcctggcagacctgggcctcagcgacgacgaatgggacagacccaccgccggc
gggttcactgtgggtcatgacgggaccgagccggaccaggaagagaacttctggtctcag
gccctggaagatctagagacctgtggccagtctggcatcctgagggaactggaggccacc
attatgtcaggcagcagtctgagtctgaaccatgaccctgctcctctgaggagccacctg
ggtcggcaggccagcttccaggagcgcagcgcagcccggccgcagtacaaccagtcctcg
cgctccaacaccctgcccagcgacggggggcgcaaggccttcgccatgaggaagatgaag
caggagatgaatgacgtcatgtcgcccaccccgntggagctgcacaaggtgagtctgttg
aaggagtcggaccttgaagactttggcttcagtgtgtcggatggcctcctggagaaaggt
gtctatgtcaacaacatccgtccaggtggacctgcagaggtcgggggcctgaagtcctac
gacaggctgctacagatcaaccacgtgaggaccagagacttcgactgctgtctggtggtc
cctctgatcgccgagtcaggaaacaaactggacctggtgatcagcaggaaccctgcttcc
tccagaaccgggtcccagtcagaactgaaccagctacccgccgaggagcctgttatcaac
tggaccgagccggggacagcctctctggccctccaccgaaccagaaccaccattccttgt
ccaggatggctgctggaatcggggtga
DBGET
integrated database retrieval system
