Oncorhynchus tshawytscha (Chinook salmon): 121845392
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Entry
121845392 CDS
T05605
Name
(RefSeq) LARGE xylosyl- and glucuronyltransferase 1-like
KO
K09668
glycosyltransferase-like protein LARGE [EC:2.4.2.- 2.4.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00515
Mannose type O-glycan biosynthesis
otw01100
Metabolic pathways
Module
otw_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
121845392
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
121845392
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
121845392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_49
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
121845392
NCBI-ProteinID:
XP_042172585
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MLGMCRGRRKFLAASLALLFIPALTWLYLSAGNFQVKPLPLSPLLPQLSTLTARGGALGG
GVSREALELRVREVEEENQLLRRELSRPPRSPAGPASHHTNHRGNQSKTHSEEGTGDNEA
GLKAGSSGNRSDCVQQPAVDKCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHII
TDSTAQQILASLFRTWMVPAVRVDFYDADELKAEVSWIPNKHYSGIYGLMKLVLTKTLPP
DLQKVIVLDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNLWKNHRPWPALER
GFNTGVILLLLDRLRKLRWEQMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVHQLP
CFWNVQLSDHTRSEKCYKDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLR
RELFGCPSETDHNSENLQKTLSELDEDDPCYEFRRERFTVHRTHLYFLHYEYEPSTDHTD
VTLVAQLSMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYTQGSEVLMSRGNVGYHI
VYKEGQFYPVNLLRNVAMRQVNTPYMFLSDIDFLPIDTVMYGLYEYLRKSVVQLDMANSK
KALVVPAFETLRYRLSYPKSKAELLSQLDMGTLFTFRYHVWTKGHAPTNFAKWRTATTPY
RVQWEADFEPYVMVRRDSPEYDRRFVGFGWNKVAHIMELDAQEYEFVVLPNAYMIHMPHA
PSFDITKFRSNKQYRVCLKTLKEEFQQNMSRRYGFAALKYMTAENNS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaatgtgtcgcgggcgcaggaagttcctcgctgcctccctcgccctgctcttc
atccccgcactcacctggctgtacctctccgctggtaacttccaagtgaagcccctcccc
ctgtcgcccctgttgcctcagttgtccacgttgacggccaggggcggggccttgggaggg
ggtgtgtctagggaggcgttggagctgagggtccgtgaggtcgaagaggagaaccaactt
ctccggcgtgaactcagccgacccccccggagccctgctggccctgcttcacatcacacc
aatcaccgcggcaaccagagcaagactcactcggaggagggaacaggggacaacgaggcg
gggcttaaagctggctcctcgggcaacaggtcagactgtgtgcagcagccagcggtagac
aagtgtgagaccattcacgtggccatcgtgtgtgccgggtacaacgccagtcgtgatgtg
gtgacactcgtcaagtcagtcctttttcacaggcgaaaccctctccacttccacatcata
acggactctacagcccagcagatcctagcctctctgttccgtacctggatggtccctgct
gtcagggtggacttctacgatgcagacgaactcaaggctgaggtgtcgtggatccccaac
aagcattactccggtatctacggtctgatgaagctggtgctcaccaagaccttaccccca
gacctgcagaaagtcatcgtcctggacacagatatcaccttcgctacggacatcgctgag
ctctgggccgtcttccacaagttcaaaggtcagcaggttctaggtctggtggagaaccag
agtgactggtacctggggaacctgtggaagaatcaccggccctggcccgccctggagagg
ggcttcaatacaggtgtgatcttgctgctgctggaccgactgaggaagctgcggtgggaa
cagatgtggagactgacagccgagagagaactgatgagcatgttgtctacatcactggct
gaccaggacatcttcaacgccgtgatcaaacagaaccccttcctggttcaccagctgccc
tgcttctggaacgtccagctgtcagaccacacccgctctgagaagtgctacaaggatgtt
tcagacctcaaggtcatccattggaactctcctaagaagctgagagtgaagaacaagcat
gtagaattcttcaggaacctgtacctcaccttcctggagtacgacggaaacctcctgaga
cgagaactcttcggctgccccagcgagacagaccacaacagcgaaaacctccagaagact
ctgtcagagctggatgaagatgatccgtgttatgagttccgccgggagcgtttcacggtt
cacaggactcacctctatttccttcactacgaatatgaacccagcacggaccacacagac
gttacactggtggcacagctctccatggacagactccagatgttagaggctatctgtaaa
cactgggaaggtcctatcagcctggccctgtatctctctgacgctgaggctcaacagttc
ctgcgctacacccaggggtcagaggtcctgatgtccagggggaacgtgggctaccacatc
gtctacaaggagggtcagttctatccggtcaacctgctcaggaacgtagccatgcggcag
gtcaacacgccctacatgttcctgtcagatattgacttcctgcccatagatactgtaatg
tacggcctctacgagtacctcaggaagtcagtggtacagctggacatggctaacagcaag
aaagcgttggtggtgccggccttcgagacgctccgttaccgtctgtcttaccccaagtcc
aaggccgagctgctgtcccaactggacatggggactctattcaccttcagataccatgtc
tggacgaagggtcatgctcccactaactttgctaagtggaggactgccaccacgccgtac
agagtccagtgggaagcggactttgaaccctacgtgatggtgagacgggacagtccagag
tacgacaggcgcttcgttggcttcgggtggaataaagtggctcatattatggagctggat
gcacaggagtatgagtttgtggttctgcccaacgcctatatgatccacatgcctcatgct
cccagtttcgacattaccaagttccggtccaacaagcagtaccgcgtctgcctgaagacc
ctgaaagaggagtttcaacagaacatgtctagacgatatggcttcgctgccctcaaatac
atgactgcagagaacaacagctag
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