Oncorhynchus tshawytscha (Chinook salmon): 121845443
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Entry
121845443 CDS
T05605
Name
(RefSeq) tripartite motif-containing protein 16-like protein isoform X1
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
121845443
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121845443
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121845443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
ANCHR-like_BBOX
DUF6468
Serine_rich
Motif
Other DBs
NCBI-GeneID:
121845443
NCBI-ProteinID:
XP_042172786
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
METLIIKNEENTEETHPTTGSKDVTTSMINMWDLNLNQEQEDPTTTHDKPGENTQPQNQE
QEDPTTTHDKPGQNTQPQNQEQEDTTTTHDKPGENTQPQNQEQEDPTTTHVKPGQNTQPQ
TISSGFTVTPEDVLCDSCIEIPCRAQKSCLTCLVSYCEAHLRPHLENQRFQNHRLVEPLQ
DIECHTCEEHRLPLELYCLTDGCGVCVCCECEGQGHLGHSTVPVEEARRQIQTELQKKQG
DIMKTVSVAENSIGKLQSNTASIESSVAGVRAVMEQQFYLLQGAVEEARRRATEVLEGEQ
RQALSQAEGIQAHLEQKSQELKKTLARVERLFRNKRDVDFLQEYSEWKTGAVDVCLPGLY
VGLTDRLASFSCLLTESTQELCDQLKATYRDKLKDICRTEKLGITTMVHPKMSKSFSLPE
PEMRDDFLTYASSLTFDPDTVHKFLRLTEDDRKVTNTTPWQHSYPDTPERFEYWRQVMTS
ESLYLGRHYFEAELSGEGMHVGLTYKSIDRKGVERGSCITGNDFSWSLGREGRSFSTWHA
DMEAVVEATSVFTRIGVYIDFDSGSLAFYGVTDIAMTLLYRYKAEFMEPLYPTVWLSKKD
SVVLLVGPKDPPLMKSSTLPATPITPMETSAPVSPES
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctcatcatcaagaatgaagagaatacagaagagactcatcccacaactgga
agcaaagatgtcaccacatccatgataaacatgtgggacctgaacctaaaccaggaacaa
gaggacccaacaacaacgcacgataaaccaggggagaacacccagcctcagaaccaggaa
caagaggacccaacaacaacgcacgataaaccagggcagaacacccagcctcagaaccag
gaacaagaggacacaacaacaacgcacgataaaccaggggagaacacccagcctcagaac
caggaacaagaggacccaacaacaacgcacgttaaaccagggcagaacacccagccccag
acaatctctagcgggtttactgtcaccccagaagatgtgctgtgtgactcctgcatcgag
atcccgtgccgggcccagaagtcctgcctcacctgcctggtgtcgtactgcgaggcccac
ctcagaccccacctggagaaccagaggttccagaatcaccgactggtggagcccttacag
gacatcgagtgtcacacctgtgaggagcaccggctaccgcttgaactatactgcctgacg
gacggctgcggtgtgtgtgtgtgctgcgagtgtgagggacaggggcatctggggcacagt
actgtacctgtagaggaggctcgaagacagatccagacagagctgcagaagaaacaaggg
gacattatgaagaccgtctcagtggcagagaattccattggcaagctacagagcaacact
gcatccatagagagctcggtggcaggggtacgtgctgtgatggagcagcagttctatctg
ctgcaaggggccgtagaagaggcccggaggagggccacggaggttctggagggggagcag
aggcaggcgctcagccaggccgagggcatccaggcccacctggagcagaagagccaagag
ctgaagaagaccctggccagagtggagagactcttcaggaacaagagggacgtagacttc
ctgcaggaatactctgagtggaagacgggggctgtggatgtctgtctgcctgggctctac
gtcggcctcacagatcgcctggcctccttcagctgcctgctcactgagtccacccaggaa
ctgtgtgaccagctcaaggctacctacagggacaaactgaaggacatctgcaggactgag
aaactgggcattacaaccatggtccatcccaagatgtcaaagtctttttcactgcctgag
cctgagatgcgagacgacttcctcacgtatgccagcagtctgacctttgacccagacact
gtccacaagttcctgagactaaccgaagacgacaggaaggtgaccaacaccacgccctgg
cagcacagctacccagacacgcccgaacgcttcgagtactggcgccaggtgatgacctca
gagagcctctacctgggccgacactactttgaggcagagctgagtggggagggcatgcac
gtgggactcacctacaagagcatcgaccggaaaggcgtggagagaggcagctgcatcaca
ggaaatgacttctcgtggagcctcggaagggaggggcggagcttttccacttggcatgct
gatatggaggcggtcgtggaagccacaagtgtgttcacgagaatcggcgtctacatcgac
tttgactcaggctcattagctttctatggtgtgactgacatcgctatgacactcctctac
aggtacaaggctgagttcatggagcccttgtatcctactgtctggctctcaaagaaggac
agtgtggttttattggttggtcctaaggaccccccactaatgaagagctcaactctgcct
gccacccccatcactcccatggaaacatcagctcctgtcagtccagaatcataa
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