Oncorhynchus tshawytscha (Chinook salmon): 121845626
Help
Entry
121845626 CDS
T05605
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04136
Autophagy - other
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121845626 (wipi1)
04136 Autophagy - other
121845626 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121845626 (wipi1)
03029 Mitochondrial biogenesis [BR:
otw03029
]
121845626 (wipi1)
Membrane trafficking [BR:
otw04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
121845626 (wipi1)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121845626 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_EML
Beta-prop_IFT140_1st
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
RMC1_N
EIF3I
Motif
Other DBs
NCBI-GeneID:
121845626
NCBI-ProteinID:
XP_042173147
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
METGEGADGPSGPGEPGAGPELTGLGCASFNQDSTSLAVGTKTGYKLFSVTSVDKLDCIY
ESETPDVYIVERLFSSSLVVVVSLSIPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQRL
VVCLEESVYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLAYPGSSTIGEIIVYDA
NNLSTVTMIPAHDSPLAALTFNSSGTKLASASERGTVIRVFSIPEGQRMFEFRRGMKRYV
NISSLSFSPDAQFLCASSNTETVHIFKLEQHGPSGEEECPTWGSYVGKMFSAASSYLPAQ
VSGVMSQERAFATVRLLVAGQRNVCTLATIQKLPRLLVASSDGQLFIYNVDPQDGGECVL
AQKHRLFGEDEDKEEGVESEGSEVTVPVQACPSYAATVAIPATGPVTTTLTGYSEDGGAK
KGEVIPEHEFAAGPVCLDDENEFPPINWCRDGTRGGQGRRL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggagagggagcagacggtcctagcggaccgggtgaaccgggagccgggccg
gagctgacggggcttggctgcgcctctttcaaccaagactccacgtcattggcagtggga
accaagacaggctataagctgttctctgtgacctcagtggacaaactggactgcatctac
gagagcgagaccccagacgtgtacatcgtggagaggttgttctctagcagtctggtggtg
gtggtcagtctctccatccccagacggatgaacgtctaccacttcaagaagggaacggag
atctgcaactacagctacagtaacaacatcctctctgtcaggctcaacagacagaggctg
gtggtgtgtctggaggagtccgtgtacatccacaacatcaaagacatgaagctgctgaag
acccttctcaacacgccctccaacccctcaggtctgtgtgctctgtccatcaaccattcc
aactcgtacctggcctacccaggcagctccaccatcggagagatcatagtttacgatgcc
aacaacctgagcactgtcacaatgatcccggcccatgacagtcccctggctgctctcacc
ttcaactcgtcaggcaccaagctggccagcgcctcggagaggggtactgtaatccgtgtg
ttctccatcccagagggacagcgtatgtttgagttccgcagagggatgaagaggtacgtc
aatatcagttccctgtccttcagtcctgacgcccagttcctctgtgcctccagcaacact
gagaccgtacacatcttcaaactagaacagcacggacccagtggagaggaggagtgtcct
acctggggatcctacgtagggaagatgttctctgcagccagcagctacctcccagcccag
gtgtctggcgtgatgagtcaggaaagagccttcgccactgtacgcctcctagtggccggg
cagaggaacgtctgtaccctcgccacgatccagaagcttcctcgtctgctggtggcctcc
tctgacggacagctgttcatctataacgtcgaccctcaggatggaggagagtgcgtcctg
gctcagaaacacagattgtttggtgaggatgaggacaaggaggaaggggtggagtcagaa
gggtcagaggtcacggtgcccgtccaggcatgtccatcatacgccgccactgttgccata
ccagccaccggtccagtcactaccacgctcacaggttactctgaggatggtggggctaag
aagggagaggtgatcccagaacatgagtttgctgctggtcccgtctgtctggatgatgag
aacgagtttcctccaataaattggtgccgcgacggaactcgaggtggccaggggcgtcgt
ctgtga
DBGET
integrated database retrieval system
