Oncorhynchus tshawytscha (Chinook salmon): 121845705
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Entry
121845705 CDS
T05605
Symbol
clec16a
Name
(RefSeq) protein CLEC16A
KO
K19513
protein CLEC16A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121845705 (clec16a)
03029 Mitochondrial biogenesis [BR:
otw03029
]
121845705 (clec16a)
Membrane trafficking [BR:
otw04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
121845705 (clec16a)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
121845705 (clec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLEC16A_C
FPL
Flu_NS2
DUF6136
Motif
Other DBs
NCBI-GeneID:
121845705
NCBI-ProteinID:
XP_042173419
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MFGRSRSWGGGQGKTKNIHSLDHLKYMYHVLTKNTTVTDSNRNLLVETIRSITEILIWGD
QNDSSVFDFFLEKNMFAFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSNNH
VNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFNHP
ESMVRIAVRTITLNVYKVSLDNQHMLHYIRDKTAVPYFSNLVWFIGSHVIELDKCVQTDQ
EHRNRGKLSDLVAEHLDHLHYLNDILTINCEFLNDVLTDHLLNRLFLPLYVFSLVCPEQS
EDRKINPQVSLNLLSQVFLIIHYQPLVNSLAEVIFNGDLSVFTQHKTTVSAGVRRFTKPP
ESLERSLELSCNRGRKRAQKRPNYKNLGEEEEEEERPGGGEEGLEDSEREREKAKGTEGS
SKGSSRTSGEMEEIEMVVMDKGKETSSSSSATEQNITDEEKTAAAARTQRKRPFLDMVYS
ALDCSEDDYHALFVLCLLYAVSHSKGINRELLERLQLPVPDQERSCYSQVLVERLIRVMN
VAAQPDGKVRLATLELSCLLLKRSVLSSSSSSSSSPAHCIIKDVHLACLEGAREESLHLL
RRFYKGEEIFLDMFEDEYRSMTSKPLNVEYLMMDASVLLPPTGTPLTGIDFVKRLPCGGV
EKTRRAIRVFFMLRSLSLQLQGEPETQLPLTRSEDLIKTDDVLDLNNSDLIACMVVSKEG
GQAQRFLAVDVYQMSLVEPETKRLGWGVVKFAGLLQDMQVSGVEDDSRALNIIIHKPSSN
PHAKPLPILQANFIFADHIRCIIAKQRLAKGRIQARRMKTQRIAALLDLPVQPSSSEVLG
FGQTGNTAAGGQLPFRFYDQSRRAPNDPTAQRSVFASVDKVPGFAVAHCVSQHSPSPLSS
PSPPSSGSTGRCDSVTASTISANSPTDEETFLEHTPPSSVSGGEAGGRGGELTGSCSPVP
SVLAPSLTPASQPNISLLTDDNTDSLSVESLTLLPPADHLHALGSHTHLGTDTAIREEEE
EEEEGLEKREGEEPKEEVEGSAMEEEEEETETETTIQETAEAEMGTPTEQDTPLSSEGDT
PLSSEGDTPLSAQRGGDPRTQLHQKGKHTCRTHPQKHPD
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtcggtcacggagttggggaggaggacaggggaaaacaaaaaatatccattcc
ctggaccatctgaagtatatgtaccatgtcctgactaagaacacaacggtaacagacagc
aacaggaacttgctggtggagaccattcgctccatcactgagatactcatctggggagac
cagaacgatagctccgtcttcgacttcttcctggagaagaatatgtttgcgttcttcctg
aatatccttcgccagaagtccggccgctacgtctgtgtccagctactccagacgcttaac
atcctgtttgaaaatatcagccacgagacgtcgctgtattacctgttgtccaacaaccac
gtcaactccatcatcgttcacaagtttgacttctcagacgaggagatcatggcctattat
atctccttcctgaagaccctgtcactcaaactgaacaaccacactgtacacttcttctat
aacgagcacactaatgattttgccctgtacaccgaggccattaagttcttcaaccacccg
gagagcatggtccgtatcgcagtcagaaccatcacactgaacgtctacaaggtctcattg
gacaaccagcacatgctgcactacattcgagacaagacggcggtcccttacttcagtaac
ctggtctggttcatcggctcccacgtcatagagctggacaagtgtgttcagacggaccaa
gagcatcgtaaccgggggaagctgagtgacttggtagcagagcatctcgaccatctccac
tacctgaacgatatcctgactatcaactgtgagttcctgaacgatgtcctgacagaccac
ctgctcaaccgtctgttcctgcctctctacgtcttctctctggtctgccctgaacagtct
gaagatcgtaagatcaaccctcaggtgtcccttaacctactgtcacaggtgtttctcatc
atccactaccagccgctggtcaactctctggctgaagtcatcttcaacggagacctgtct
gtcttcacacagcacaaaaccacagtcagcgcaggcgtccgtcgcttcaccaagcctcct
gagtctctggagcggtctctggagctgtcctgcaatcggggtcgcaagcgcgcccagaaa
cgccccaactataagaacctgggagaggaggaggaggaagaggagaggccggggggagga
gaggagggcttggaggacagcgagagagagagggagaaggctaaaggtacagaagggagc
agtaagggaagcagcaggacaagtggggagatggaagagatagagatggtggtgatggac
aaggggaaggagacgtcgtcgtcgtcgtcggcgacggaacagaatatcaccgacgaggag
aagactgctgccgctgctcgcacacagaggaagagaccgttcctagacatggtgtacagt
gctctagattgtagtgaagacgattaccatgctctgtttgtactctgtctcctctacgct
gtgtcacacagcaaagggatcaaccgtgagttgttggagaggctgcagttaccagtccca
gaccaggagaggagctgttacagccaggtgttggtggagagactcatacgagtgatgaac
gtggccgcacaaccagatggtaaggtacgtctggctactctggagctgagctgtctgctg
ttgaaacggtccgtcctctcctcctcctcctcctcttcctcctctcctgctcactgcatc
atcaaggacgtacacctggcctgtctagagggagccagagaagagagtctgcatctccta
cggcgtttctataagggggaggagatcttcctggacatgtttgaagatgagtacaggagc
atgacgagtaagcccctgaacgtggagtacctcatgatggacgcgtccgttctacttcct
cctactggtactcctctgactggaatagacttcgttaagagactgccctgtggaggagta
gagaagaccagacgggccatccgtgtgttcttcatgctgagatcactatctcttcagctg
cagggagaaccagagacgcagcttcctctcactcgctctgaagacctcatcaagaccgac
gatgttctggacctaaataacagtgatctgatagcctgtatggtggtcagtaaggaagga
ggtcaggctcaacggttcctggcggtggatgtttaccagatgagtctggttgaacctgaa
actaaacgtttgggctggggagtggtcaagttcgctggtctgttacaggacatgcaggtg
tctggggtagaggatgacagcagagctttaaacattatcatccacaaaccctcgtccaac
ccccacgccaagcccctccccatcctgcaggcaaacttcatattcgccgaccacatccgc
tgcatcatcgctaagcaacgcctggccaagggcaggatacaggccagacgtatgaagaca
cagaggatagcagcgttactagaccttcctgtccagcccagttcgtcagaggttctgggc
ttcggccagacaggaaacactgctgccggaggtcaactccctttccgcttctacgaccaa
tcgcgtcgagcgcccaacgaccccaccgcacagagatctgtgttcgcctccgttgacaaa
gttccagggtttgcggtggcccactgtgtctctcagcacagcccgtcacccctctcctcc
ccctccccaccctcctcaggcagcaccggacgatgtgactctgttacagccagtacgata
tcagccaacagccctacagatgaggagacgttcttggagcacacccctccttcttcggtc
tccggtggagaggcaggaggaagaggaggagagttaaccgggtcttgttcccctgtcccg
tctgtcctcgcccccagcctcacccctgcctcccagcctaacatctctctactgaccgac
gacaacacagactctctgagcgtcgagtcactgaccctgctgcccccggctgaccacctg
cacgcactcggctcacacacacacctcggcactgatacggctatcagagaggaggaggag
gaggaggaggaggggctagagaagagagaaggggaggagccaaaggaggaagtggaaggg
tcggcgatggaggaagaggaggaggagactgaaaccgaaacaacaattcaagagacagct
gaagcagagatgggaacgcccactgagcaagacacgcccctttcttctgagggagacaca
cccctttcttctgagggagacacacccctttctgctcagaggggaggagaccccaggaca
cagctgcatcagaagggaaaacacacctgcaggacacacccacagaaacaccctgattaa
DBGET
integrated database retrieval system
