Oncorhynchus tshawytscha (Chinook salmon): 121845859
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Entry
121845859 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: multiple epidermal growth factor-like domains protein 11
KO
K24068
multiple epidermal growth factor-like domains protein 10/11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121845859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121845859
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
121845859
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Others
121845859
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
121845859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
hEGF
EGF_2
JAG1-like_EGF2
DL-JAG_EGF-like
GAPT
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
121845859
NCBI-ProteinID:
XP_042173963
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
CQADFWGPHCTNRCQCQNRAQCNPITGACVCTDGYQGWRCEELCEAGLYGKGCQLECQCL
NGATCHHETGECLCAPGYTGAICGERCPSGSHGAQCELRCPCQNGGTCHHVTGECSCPAG
WMGSVCAQPCQFGTYGINCSQECPCRNRGLCDHISGQCQCTAGYRGERCQEECPGGSYGP
QCSHKCDCQNRARCYHVNGACLCDEGFKGPSCQDRFCPSGQYGLICDKYCPCNASNTLSC
HPLSGECACAAGWAGLFCNETCPSGYYGEGCKEACACANGADCEGFTGACVCAPGVKGDD
CSLTCPAGVYGANCSSPCNCHNQIACSHIDGSCMCREGWQGVDCTISCSSDTWGLNCNQT
CLCANGAACDPGNGTCTCAPGWMDEYCDTTCPEGTYGEQCREYHPCDCIHADGCDPVRGD
CRCLAGWTGVNCDSVCVEGRWGPDCSYSCTCENGGSCSPEDGTCVCAPGYRGTSCRRICS
PGFYGQRCSQSCPQCIHSDGPCHHITGHCECLSGFCGSLCNQVCPSGRYGKGCAELCMCS
NNGTCNPIDGSCQCYPGWIGEDCSTVCPQGAWGPDCIHTCNCHNGAQCIATDGQCSCSAG
WSGLYCTQRCSSGFFGTDCSEVCRCQNGADCDHITGQCSCRTGFIGHSCELKCRPECRPE
CRPVFDCVSAAVCPDDGGAESYTKISPALASEHQSAGAVMGIIFLLLFIMTVLGVVVWWR
HHQREKGGQHMPSVSYSPALRISSQGYSLSDYMKGSLSSTCSLNSENPYATINDPLAVAC
KHTESSYVEMKSPVHHDMSYCSSAIVTTTATHTVSKNVYDVEPKVSVLQGCNGVVVPTYP
QNPYDLPRNSHIPSHYDLLPLRHSQSYSPTHSQDHSHQSHSPPLPGSPTSSLL
NT seq
2684 nt
NT seq
+upstream
nt +downstream
nt
gttgtcaggctgacttctggggcccccactgcactaaccggtgccagtgtcagaaccggg
cccagtgtaaccccatcacgggggcgtgtgtgtgtacggacgggtaccagggctggcgct
gtgaggagctgtgcgaggcagggctctatgggaagggatgccagctagagtgccagtgtc
tcaacggtgccacctgccatcacgagaccggagagtgcctctgtgcaccgggatacaccg
gggctatctgtggtgagcggtgtccctctggtagtcatggcgcccagtgtgagctgcgtt
gcccgtgtcagaacggtggaacgtgccatcacgtcacgggggagtgctcctgccccgctg
gatggatgggctcggtgtgtgcccagccgtgccagtttggcacctacggcatcaactgta
gccaggagtgcccctgccggaacagaggtctgtgtgaccacatcagcgggcagtgccaat
gtaccgccggctacagaggagagagatgtcaggaggagtgtccgggggggtcgtacggtc
ctcagtgttcacataagtgtgactgtcagaacagagcgaggtgttaccatgtcaacgggg
cctgtctgtgtgacgaggggttcaaaggtccgagctgtcaggacaggttctgtccctctg
gacagtatggactcatctgtgataaatactgtccctgtaacgcctcaaacacactcagct
gccatccgttgtcgggggagtgtgcgtgcgcggcggggtgggcgggtctgttctgcaacg
agacctgtccgtcaggttactatggcgagggatgtaaggaggcatgtgcgtgtgccaacg
gagccgactgtgagggcttcaccggcgcctgtgtctgtgcccccggggtcaaaggtgatg
actgttctctgacctgtcctgctggggtgtatggggccaactgttcctctccctgtaact
gccacaaccagatcgcctgctcacacatcgacggatcctgcatgtgcagagaaggttggc
agggtgtggattgtaccatctcgtgctccagtgatacctggggtctgaactgtaatcaga
cgtgcctgtgtgccaacggggcggcctgtgacccgggcaatggaacctgtacctgcgccc
ccggctggatggacgagtactgtgacacaacctgtcccgagggcacgtatggagaacagt
gtcgagagtatcatccgtgtgactgtatccatgccgatggctgtgaccctgtgagaggcg
actgtcgctgtctggctggatggactggtgtgaactgtgacagtgtgtgtgtggagggcc
gatggggcccagactgctcctactcctgtacctgtgagaacggaggctcctgctcaccgg
aggacgggacgtgtgtgtgtgcccccggatacagaggcacctcctgcagacgcatctgtt
ctccagggttctatggtcagcgctgcagtcagtcctgtcctcagtgtatccatagcgatg
gtccctgtcaccacatcacaggacactgtgagtgtctgtcaggattctgtggctctctgt
gtaaccaagtgtgtcccagtggcaggtatgggaagggctgtgcagagctgtgtatgtgta
gtaacaacgggacctgtaaccccatcgatggctcctgtcagtgctacccaggatggatcg
gagaggactgctctacagtgtgtccccagggtgcgtggggtccagactgcatccatacct
gtaactgtcacaacggggctcagtgcatcgctacagacggacagtgtagctgcagcgcag
ggtggagcggactctactgtacacaacgttgtagttcagggttctttggtaccgactgct
ctgaggtgtgtcggtgtcagaacggagcggactgtgaccacatcactggtcagtgctcct
gtcggaccggattcatcggacacagctgtgaactcaagtgtcgtcccgagtgtcgtcccg
agtgtcgtcccgtgtttgactgcgtgtcagcagctgtctgccctgatgatggaggagctg
aatcctacactaagatcagcccggccttggcatcagagcaccagtcagcgggcgctgtca
tgggcatcatcttcctcctcctcttcatcatgaccgtgttgggggtggtggtgtggtggc
ggcatcaccagagagagaaaggagggcagcacatgcccagtgtgtcctacagccctgccc
tgaggatcagcagtcagggttactccctctctgactacatgaagggttccctgtccagca
cctgctctctgaacagtgagaacccctacgccaccatcaatgacccgctggccgtggcct
gtaaacacacagagagcagctatgtagagatgaagagtcctgtccaccacgacatgtcct
actgctcctctgctatagtcaccaccaccgccacacacaccgtcagcaagaatgtctatg
atgtggaacccaaggtgagtgttctccagggctgtaacggtgtggtggttcccacgtacc
ctcagaacccgtacgacctccccaggaacagccacatccccagccactacgacctgctgc
ccctgagacacagccagagctacagccctacacacagccaggaccacagccaccagagcc
acagcccacccttgcccggcagccctaccagctccctgctatag
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