Oncorhynchus tshawytscha (Chinook salmon): 121845884
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Entry
121845884 CDS
T05605
Name
(RefSeq) proto-oncogene vav-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121845884
09142 Cell motility
04810 Regulation of actin cytoskeleton
121845884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_9
SH3_1
SH3_2
CH
SH2
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
PH_5
PH_10
C1_2
Motif
Other DBs
NCBI-GeneID:
121845884
NCBI-ProteinID:
XP_042174011
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MELWRHCAVWLIECRVLPESHRVTWDSAQVCELAQALRDGVLLCQLLNNLLPHAINLREI
NLRPQMSQFLCLKNIRTFLGVCQEKFHLRKTELFEAFDLFDVRDFGKVIDTLSILSQSPI
SIQKGFQSFPIDGCIADDDIYNGLSDQIDETVDEDDDLYDCVEDEENEGDEIYEDLMRAD
EPSETQHQQKMEVDKRECCLQEIRLTEEKYTDTLESILQHFMKPLQKFLQPHDIESIFIN
TADLAVTHRSLLGEIQTSILTLNAENLYQVFINYKERLLPYGRYCSQVEAATKHLDKMSA
MKEGVKMKLEECSKRANSGRFSLRDLLMVPMQRVLKYHLLLQELVKHTSSNTEKENLRTA
LDAMRDLAQCVNEVKRDNEIIKQITTFQLSIENMTQSLALYGRPKIDGELKISSSEKKSK
QDRYAFLFDKAMLVCKKKSGETMELKEIIDLQYYQLRDETTGEKDSKKWSHFFLLIDCYG
KSGYDLFFKTRDLKKKWLEQFEMALSNMCPENCTANSHDFQMHCFEDTTSCKACSMLLRG
IFFQGYRCSRCRMAAHKECLGRVPGCGRNSDHSGNVKKNKKSAPHRQASPGLPTMEVCQE
YYGLPPPPVAFGQPLHLSMGDVIELTRADADLTWWEGKNVTIGQMGWFPCSKVQPFISRP
TPDLSDFLWFAGNMDRSAAKNLLISRSDGTFLVRQKDGGEFAISLKFNMDIRHIKITSTE
GLYRINEKKAFKGLIEMVQFYQQHSLKEYFKDVDTTLQTPFNQPEQSDTPFNTPSPGTHT
HTTLQTPFNQPEQSDTPFNTPSPGGSIRSFGTARARYDFSARDRTELSLREGDTVKVLSK
KAHNGWWKGEVYGRVGLFPANYVEEDYSDYC
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtggcgtcactgtgccgtgtggctgatagagtgcagggtgctccctgagagt
cacagggtaacgtgggacagtgctcaggtgtgtgagttagcccaggctctgagggatgga
gtcctgctctgtcagctgctgaacaacttactaccccacgccatcaacctccgagagatt
aacctccgaccccagatgtcccagttcctgtgtctgaagaacatccgtacgttcctgggg
gtgtgtcaggagaagttccacctgaggaagactgaactgtttgaagccttcgacctgttt
gatgtcagagacttcggcaaggtgatagataccttgtccattctgtcccagtcccccatc
tccatccagaagggtttccagtctttcccaatagatggctgtattgctgatgatgatatc
tacaacggtctctctgaccagattgatgaaacagtggatgaggatgatgacctttatgac
tgtgtggaggatgaggagaatgagggggatgagatatatgaagacctgatgagggccgat
gagccatcggagacgcagcatcagcagaagatggaggtggataagagagaatgctgcctg
caggagatcagactgacagaggagaaatacactgacacgctggagtccatattacagcac
ttcatgaagcccctccagaagttccttcagcctcacgacatagagagcatcttcatcaac
acggcggatctggctgtaacccatcgtagtctgctgggggagatccagacctcgatctta
accctgaatgcagagaacctctaccaggttttcatcaactacaaagagaggttgttgccg
tatgggcggtactgcagtcaggtggaagcagctactaaacacctggacaagatgtccgcc
atgaaggaaggagttaagatgaaactagaggagtgctctaagagggctaacagtggcagg
ttctctctgcgtgatctactcatggttcccatgcagagagtcctcaaataccacctactg
ctccaggagctagtgaaacacacctccagcaatacagagaaagagaaccttcggacagct
ctagatgccatgagagacctggctcagtgtgtgaacgaggtaaagagagacaacgagatc
atcaaacagatcaccaccttccagttgtctatagagaacatgactcagtctctggctctg
tacggacgacccaagatcgatggagaactgaagatcagctcctcagagaagaagtccaaa
caggacaggtatgcgttcctgtttgacaaggcgatgctagtgtgtaagaagaagagtgga
gagacgatggaactgaaggagattatagacctgcagtactaccagctacgagacgagacc
accggggagaaggacagcaagaagtggtcacattttttcctgcttatagactgttatggg
aagtcaggatacgaccttttcttcaagaccagagatctcaagaagaaatggctggagcag
tttgagatggccctgtccaacatgtgtccagagaactgtactgccaacagtcatgacttc
cagatgcactgctttgaagataccacctcctgcaaggcctgcagtatgctcctcaggggg
atattcttccaggggtatcgttgtagtcgttgcagaatggccgctcataaagaatgtctg
ggaagagtaccaggctgcggacgcaactcagaccactcagggaacgtgaagaagaataag
aagtcagctcctcacagacaagccagtccaggccttcctacaatggaggtgtgtcaggag
tactatggtttacctccgccccctgtagcgttcggccaaccactgcacctctccatgggt
gatgtcatcgaactgacaagagccgatgccgacctaacgtggtgggagggcaagaacgtg
acgattggtcagatgggttggttcccctgcagtaaggtccagcccttcatctctagacca
actcccgacctatccgacttcctatggtttgcggggaacatggaccggtcagcggcaaag
aacctcctgatttcacggtcggacggaacgtttctggtccgccagaaagacggaggagag
ttcgcaatcagcctcaagtttaacatggacatcagacacatcaagatcacgtcaacagaa
ggcctctaccgcatcaacgagaagaaagcattcaaagggttaatcgagatggttcagttc
taccagcaacattcattgaaggagtattttaaggatgtggacaccaccctccagaccccc
ttcaatcagcctgaacagagtgatacacccttcaacacaccctccccaggtacacacaca
cacaccaccctccagacccccttcaaccagcctgaacagagtgatacacccttcaacaca
ccctccccaggtggcagtatacgttcgttcggcacagcgagggccaggtatgacttctca
gccagagaccgtacagagctgtctctgagagaaggagacacagtcaaggtcctgtctaag
aaagctcacaatggatggtggaaaggagaggtctatggacgggtcggtctgttcccagct
aactatgtagaagaggattactctgactactgctga
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