Oncorhynchus tshawytscha (Chinook salmon): 121845926
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Entry
121845926 CDS
T05605
Symbol
tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121845926 (tbc1d1)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121845926 (tbc1d1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121845926 (tbc1d1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121845926 (tbc1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
DUF3350
PID
DUF2594
Motif
Other DBs
NCBI-GeneID:
121845926
NCBI-ProteinID:
XP_042174196
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MAMLPWVVAEIGRPRPGERDKPVVGRPPGSPASRGTHTGNGESVSSRRHQAVCLCVSASW
VRCVWTEEEVARDRRPWDPLTHTHTVLFECRPHRVTKLLHDSREPCSFGCLVRDTHLCYC
YVFQCQDCTKVPEIISTLRQAGKSSARNDDLAAPKPAASSSEDCTPSASSAFGAATMFAK
RFEVLFCGRVTVAHKKAPPALIDECIEKFSQSVGAGGDPKPDSGGGLVDGLRRALALPTL
TRNGGTGDGEVRGGGYGASSGGRPVVFKPDPSFPCLRALDENGLSPEPHTHTAGVQPTSL
QENRTMLFMVGRSQVFLVSPDTKTVAIEKSFREISFCSQGIHHVDHFGFICRETVEGGSC
TFVCYVFQCTDESLVDEIMLTLKQAFSVAALQQSVRTRSQQCDSCPMQQLHRLCERIEGL
LPSKAKLEFQKHLATLDNQEQATVFESTVRASPKSDQEENELVMGSLRSLYEQKQRSHQH
TDHRPVPEAPAPVEVQSSSRQRLEQFKTRAKRSLTESLEGIWKGSSKARAQRENSEGNIS
SSDSTLNSTEQYPSLEDPLPSSNPLRSHNSTGDLKHLDTSPLSVSPSFSSLSLSSRDARS
QPHGFRRRASTFSHSPSYHDHAPSYPDHTPSYTHTPQVPSGSTKPKLVRHYSVSTDTPHQ
SNDVAALSSPVAVCVVGDSPLRRHSWRQQIFLRVATPQKNTDSNDRGDCSLDGRGVSVCG
VGDGSLGVVPEERKKRGRAELRQLWRKAILQQTLLLRMERENNKIQASESKRQRLDYEEI
TPCLKDVTLVWESMLGTQARSKVKFNTDTVHSAVEQGVPRQYRGEVWKFLSEQFVLRQPV
PVRSPSDNRPYKELLKQLTSQQHAILIDLGRTFPTHPYFQAQLGSGQLSLYNLLKAYSLL
DPEVGYCQGLSFVAGVLLLHMGEEEAFNMLQFLMYHMGLRKQYRPDMIILQIQMYQLSRL
LHDYHRDLYVHLEQHEIGPSLYAAPWFLTAFASHFPLGFVARVFDMLFLQGSEVIFKVSL
SLLGSHKPLILQHDSLESIVDFIKTTLPNLGLVQMEKTINQVCEMDLSNQLQAYEVEYHV
LQDELCDTPAHLNQSQRTAQLERTNQSLRQQNLDLLEELQVSQARVCRLEGQVEGLAQSE
ALLRERVFDLEEERNGLRNAVTHLHTLLTALGIHTHTTHRDFNLDPHTHSAADTDGQRDG
QGVDVPTREGPRLGQAMSSPLLPHPLALPEH
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgccctgggtcgtggctgagatcgggaggcctcggcctggggagagagac
aagcccgtagtgggtcggccgcctggaagtcctgcaagtagaggcacacacaccggaaac
ggagagagcgtttcctcacgacgacatcaggcggtgtgtctgtgtgtgtccgcctcgtgg
gtgaggtgtgtgtggacggaggaggaggtggcgagggacaggcgaccgtgggaccccctc
acacacactcacacggtgttgtttgagtgccggccgcaccgcgtcaccaagctgctccac
gacagcagggagccgtgtagctttggttgtctggttcgagacacacatctctgttactgc
tacgtcttccaatgccaggactgcaccaaggtccctgagatcatcagtacgctgcgtcag
gctgggaagagctcggcgcgcaacgatgacctggcagcgcccaaacccgccgcctcttcc
tcagaagactgtactccgtccgcgtcgtccgccttcggcgctgccaccatgttcgccaag
aggtttgaggttctgttctgcggaagagtgaccgtcgctcacaagaaagccccgcccgct
ttgattgacgagtgcatcgagaaattcagccaatcggtaggggccgggggcgatcctaaa
cccgatagcggcggtggattggtggacgggctgcggagagctctggccttaccgacgcta
acgcgaaatggaggaacgggggatggagaggtcaggggaggaggatacggtgcctctagt
ggtgggaggccggtggtgttcaaaccagaccccagtttcccctgcctccgggccctggat
gagaacggactgtcacctgaaccacacacacacaccgctggggtccagcccaccagtcta
caggagaacaggaccatgctgttcatggtgggtcggtctcaggtcttcctggtcagtcca
gacactaagacggttgccatagagaagagcttcagagaaatatctttctgctcacagggt
attcatcatgtggatcactttgggttcatctgtagagagacagtagaaggagggagctgt
acgttcgtctgctatgtcttccagtgtactgatgaatccctggtggatgagatcatgttg
actttaaagcaggcgttctctgtggccgccctgcagcagagtgtaaggaccaggagccag
cagtgtgacagttgccccatgcagcagctgcacaggctgtgtgagaggatagaaggtctc
ctcccgtctaaagccaagctggagtttcagaaacatctggccacactggacaaccaggaa
caagctacagtgttcgagagcactgtgagggccagtcctaagagtgaccaggaggagaat
gagctggtgatggggtctttgaggagtctgtacgaacagaaacagaggagtcatcaacac
acagatcacagaccggtaccagaggctccagccccagtagaggtccagtccagtagcaga
cagagattagagcagtttaaaaccagagctaaacgctccctcacagagtcactggagggc
atctggaagggaagtagcaaagccagggctcagagagagaacagtgaaggaaacatcagt
tcatctgactctacactgaactctactgaacagtacccctccctagaagaccccctccct
tcctccaatcctctgcgctctcacaactctacaggggacctgaaacatctggacacctct
cctctctccgtctctccttccttctcatccctgtctctgtcctcccgggacgcacggtcc
cagccgcatggcttcaggcggagagccagcaccttcagccactccccttcctaccacgat
cacgccccttcctaccctgaccacaccccctcgtatacacacacaccccaggtacccagc
ggctccaccaagcccaaactggtccggcactactctgtcagcaccgacactccgcaccag
agcaatgatgtagcagccctgtccagtccggtagcagtgtgtgtggtaggagacagtcct
ctacggagacactcctggagacaacagatcttcctacgtgtcgctacccctcagaaaaac
actgacagcaatgacaggggtgactgctccttagacggcaggggtgtgtctgtgtgcggg
gttggagacggatcactgggcgtggttccggaggagaggaagaaacgtggccgagcagaa
ctgagacagctgtggaggaaggccatcctgcaacagacactactgctgaggatggagaga
gagaacaacaagatacaggcgtcggagagtaagcgtcagcgtctggactatgaagagata
actccctgtctgaaggacgtcacgctggtctgggagagcatgctgggaacacaggccagg
tcgaaggtcaagttcaacactgacactgtccactctgctgtggaacagggagttccgaga
cagtacagaggagaggtgtggaagttcctgtcagagcagtttgtattgagacaaccggtt
cctgtcagatctccatctgacaacaggccttataaagaactgctgaaacaactgacctcc
caacagcacgccatcctcatagacctgggtcgtacctttccgacccatccttatttccag
gctcagttggggtctggtcagctgtctctctataatctcctgaaggcctactctctactg
gacccagaggtgggatactgtcagggtctcagcttcgtagcaggagtgttgttgttgcac
atgggagaggaggaggccttcaacatgctccagttcctcatgtatcatatggggcttcgc
aagcagtacagacctgacatgattatactacagattcagatgtaccagctgtcccgtctc
ctccatgactaccacagagacctgtacgtccatctggaacagcatgagataggaccgtct
ctctacgctgctccctggttcctcacggccttcgcctcgcacttccctctgggctttgta
gccagggtgtttgacatgttgtttctccagggttcggaggtgatcttcaaggtgtcgcta
agtcttctgggtagtcacaagcccttgatcctacagcacgacagtctggagtctatagtg
gacttcatcaagactacattacctaacctgggactagtccagatggagaagaccatcaac
caggtgtgtgagatggacctgtccaatcagctgcaggcatacgaggtggagtaccacgtc
ttacaggacgagctgtgtgacacgcccgctcacctcaaccaatcacagcgcaccgcccag
ctggaacgcaccaatcagagcctccgacagcaaaacctcgacctgctggaggaactgcag
gtgtcccaggctcgtgtgtgtcgtctggaaggccaggtggaggggctggcccaatcagag
gctctgctgagagaacgggtgttcgacctggaggaggagaggaacggactgcggaacgcc
gtcacacacctacacacactcctcaccgcgctgggaatacacacacacacaacgcacagg
gacttcaacctggaccctcacacacactccgctgccgacacagatggacagagagatgga
cagggtgtggacgtccccaccagagaggggcccagactggggcaagcgatgtcctcccct
ctcctccctcatccactggctctaccagaacattga
DBGET
integrated database retrieval system
