Oncorhynchus tshawytscha (Chinook salmon): 121846012
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Entry
121846012 CDS
T05605
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015
mRNA surveillance pathway
otw04261
Adrenergic signaling in cardiomyocytes
otw04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121846012
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121846012
09158 Development and regeneration
04382 Cornified envelope formation
121846012
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
121846012
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
121846012
03036 Chromosome and associated proteins [BR:
otw03036
]
121846012
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121846012
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121846012
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121846012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_1
EF-hand_8
DUF4187
Motif
Other DBs
NCBI-GeneID:
121846012
NCBI-ProteinID:
XP_042174684
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MLQQAAVPFSPIFGNDQPPRYEDVVQNPPLPKSRDILPPSSLAPDSSLSLSTTPETAGRH
KVQTNGLQHTHTLSHTHSLSPHTHTLSVSTPPSQTHTPSSQMHTPSARTHTPSISPMEAL
FIEEDADLGRGLNRASRHTHSHTPTRSLTHTHSRNGTAFSPHTPPSSAHTHLSPNLSHVH
VTHTLQSAGEDLTCPPTSEHTPPVTHRDDDIDRLLMDLECLSQSMGRERDRVREGERERE
AEPPLPIKTRQRGTGQGNTSPQTQPCLQTQTQINPQAQRPVPVSHLTANAQATRSTPSSP
APLLQAEGSMVGLGDEEDGALLLRILESIESFAQELVDSGGSPGNTGKTGTQSKEKEVMR
LLQDTLATAAKTDTLTQAKLPGSPPAWQDGPVHVSASTPTPAPRLTDGPVPTALPVSTAP
TPVPAPIPTTLAESVSTAPTPVPVLVPVPVPTTLAESVATDQVTPSTLPTPVPPPAVVPT
PVPPPTVVPTPVPPPTVVSTPSEAAAGREHPPVADLTAVLTTTATPPPAVTPVPSPVPPP
TPTPGEAPVATIAAPPVAVRHPVAPSNVVALRDIGSTLLIQQTPEVIRVQSNKQDKKSGT
PPPAPLSPLPPFLPPPLPLSSPTPVVLTPPPPPPPPALNIPRFYYPRGLPGATKVNHDAA
ITAIETAFTEFEEEKADIYEMGKIAKACGCPLYWKAAMFNGAGGERTGFVSVHSFIATWR
KLLHSCYDDSSKFIYLLAKPGCSYLDQEDFIPLLQDIVDTHPGLTFLKDAPEFHSRYITT
VIQRIFYVVNRSWTGRITMTELRRSNFLQTLALLEEEDDINQITDYFSYEHFYVIYCKFW
ELDTDHDLYIDPKDLARYNDHASSSRIIERLFSGAVTRGSSVQREGRMSYAEFSWFLISE
EDKKNPTSIEYWFRCMDTDGDGVLSMFELEYFYEEQCSRMEGMGIEPLPFTDLLCQMLDL
VKPESQGKITLSDLKRCRMAHIFFDTFFNLEKYLDHEQRDPFALQKDIDNECPEPSDWDK
YASEEYEILVAEETANEQLQEGTFDDDYEEAELPVQGEMVGNKMDKLLISDLSA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcaagctgctgtccccttctcacccatatttggtaatgatcaaccgccacgg
tatgaggacgttgttcagaaccctcctttacccaagagcagggatatactgccaccctcg
tcactcgctccagactcttctctctctttgtccactacgcctgagacagcagggagacat
aaggttcagaccaacgggctgcagcacacacacactctgtcacacacacactctctctca
ccgcacacacacacgttgtctgtttctacccctccatcccagacacacacaccttcatcg
caaatgcacactccgtcagcgcgcacacacactccgtccatctcccccatggaggctctc
ttcattgaggaggatgcagacctgggaagggggctgaacagggcttccagacacacacac
tcacacaccccgaccagaagcctcacacacactcacagtcggaacgggacagcttttagt
ccacacacaccccccagctccgcgcacacacacctcagccccaatctgtcacacgtacac
gttacacacacactccagtctgctggtgaagacctcacctgccccccaacctccgaacac
acccctcctgtcactcatagagacgacgacatcgacaggcttctgatggacttggagtgt
ctgtcgcagagcatgggtcgggagagagaccgagtcagagagggagagagagaaagagag
gcggagccccctctccccattaagaccagacagagggggacaggacaggggaacacctcc
ccacaaacccaaccctgtctccagacacaaacccaaatcaacccccaggctcaaaggcct
gttcctgttagccacctaaccgctaacgcccaggccactaggtcgacccccagctcgcct
gctcctctcctccaggcagagggcagcatggtggggctgggagatgaggaggacggggcc
ctgctgctgaggatcctggagagcattgagagctttgcccaggaactggtggactctggg
ggtagtcctgggaacactgggaagactgggactcagagcaaagagaaggaggtgatgaga
ctcctacaggacactctggctactgcagccaagactgacactctgacgcaggccaaacta
cctggatctccaccagcctggcaagatggacctgtacatgtgtctgcctccacaccaaca
cctgcacccagacttacagatggacctgttcctacggccctacctgtctctacagctccc
acacctgtccctgcccctatccccacaaccctagcagagtctgtctctacagctcccaca
cctgtccctgtccttgtccctgtccctgtccccacaaccctagcagagtctgtcgccaca
gaccaagttacaccttctaccctacccacacctgttccaccaccagcagtcgtacccaca
cctgttccaccacctacagtcgtacccacacctgttccaccacctacagtcgtatccaca
ccttcagaagcagccgctggacgtgaacatccacctgtagctgacctgacagctgtactt
accaccacggccacccctccaccggctgtaacacctgtcccctcccctgtcccgccccct
acacccacacctggagaggcacctgttgcaaccatcgctgctcctcctgttgccgtgaga
cacccggttgcccctagcaatgtggttgccctgagagacatcggctcgacactgctcatc
cagcagacgcctgaggtgatcagagtccagtccaacaagcaagataagaaatctggcacc
cctcctccagcccctctctccccactccctccgttcctccccccaccgctccccctctcc
tcccccactccagtcgtcctcacccctcctcctccccctcctccccctgccctcaacatt
ccccgcttctactaccctcgagggttaccaggggcaacaaaagtcaaccacgatgcggcc
atcactgccatagaaacagccttcactgagtttgaggaggagaaggctgatatttacgag
atgggcaagatcgctaaggcatgtggctgtcctctgtactggaaggcagccatgtttaac
ggagcaggaggagagaggaccggctttgtctctgttcactccttcatcgctacctggaga
aagttgttacatagttgctatgacgattcgtctaagtttatctacctcctggcgaagcct
ggctgttcctacctggaccaggaggacttcatacctttattacaggacatagtggacact
cacccaggactgacgttcttgaaggatgccccagaattccattcccgttacatcaccacc
gtgattcagcggatattctatgtggtcaaccgctcgtggacaggtcgcatcaccatgacg
gaactacgcaggagcaacttcctgcagaccctggccctgttggaagaagaggatgatatc
aaccagataacagattatttctcttatgagcatttctatgtgatctactgtaagttctgg
gagttggacacggaccacgacctttacattgaccctaaggacctggctcgttacaacgac
cacgcatcttcaagcagaatcattgagaggttgttctcaggagccgttacgcggggtagc
tcagtgcagagggaagggaggatgagttatgcagagttcagctggttcctcatctcagag
gaagacaagaaaaaccctaccagtatagagtactggttcaggtgtatggacacagatggg
gacggtgtgttgtccatgtttgagttggagtacttctatgaggagcagtgtagtaggatg
gaggggatgggcattgaacccctacccttcacagacctgctctgtcagatgctagacctt
gtcaaacctgaaagccaaggtaagataaccctgtctgatctgaagaggtgtaggatggct
catatattcttcgacacgttcttcaacctggagaaatacctggaccacgagcagagagac
cccttcgctttgcagaaggacatagacaatgagtgtccagagccttcagactgggataaa
tacgcttcagaggaatatgagatcctggtggcagaagagacagctaatgaacagctgcag
gaggggacatttgatgatgactatgaggaggcggagcttcctgttcaaggagagatggtt
gggaataagatggataagctgctcatatcagatctgtcagcatga
DBGET
integrated database retrieval system
