Oncorhynchus tshawytscha (Chinook salmon): 121846012
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Entry
121846012 CDS
T05605
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015
mRNA surveillance pathway
otw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121846012
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121846012
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
121846012
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
121846012
03036 Chromosome and associated proteins [BR:
otw03036
]
121846012
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121846012
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121846012
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121846012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_1
EF-hand_8
DUF4187
Motif
Other DBs
NCBI-GeneID:
121846012
NCBI-ProteinID:
XP_042174684
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MLQQAAVPFSPIFGNDQPPRYEDVVQNPPLPKSRDILPPSSLAPDSSLSLSTTPETAGRH
KVQTNGLQHTHTLSHTHSLSPHTHTLSVSTPPSQTHTPSSQMHTPSARTHTPSISPMEAL
FIEEDADLGRGLNRASRHTHSHTPTRSLTHTHSRNGTAFSPHTPPSSAHTHLSPNLSHVH
VTHTLQSAGEDLTCPPTSEHTPPVTHRDDDIDRLLMDLECLSQSMGRERDRVREGERERE
AEPPLPIKTRQRGTGQGNTSPQTQPCLQTQTQINPQAQRPVPVSHLTANAQATRSTPSSP
APLLQAEGSMVGLGDEEDGALLLRILESIESFAQELVDSGGSPGNTGKTGTQSKEKEVMR
LLQDTLATAAKTDTLTQAKLPGSPPAWQDGPVHVSASTPTPAPRLTDGPVPTALPVSTAP
TPVPAPIPTTLAESVSTAPTPVPVLVPVPVPTTLAESVATDQVTPSTLPTPVPPPAVVPT
PVPPPTVVPTPVPPPTVVSTPSEAAAGREHPPVADLTAVLTTTATPPPAVTPVPSPVPPP
TPTPGEAPVATIAAPPVAVRHPVAPSNVVALRDIGSTLLIQQTPEVIRVQSNKQDKKSGT
PPPAPLSPLPPFLPPPLPLSSPTPVVLTPPPPPPPPALNIPRFYYPRGLPGATKVNHDAA
ITAIETAFTEFEEEKADIYEMGKIAKACGCPLYWKAAMFNGAGGERTGFVSVHSFIATWR
KLLHSCYDDSSKFIYLLAKPGCSYLDQEDFIPLLQDIVDTHPGLTFLKDAPEFHSRYITT
VIQRIFYVVNRSWTGRITMTELRRSNFLQTLALLEEEDDINQITDYFSYEHFYVIYCKFW
ELDTDHDLYIDPKDLARYNDHASSSRIIERLFSGAVTRGSSVQREGRMSYAEFSWFLISE
EDKKNPTSIEYWFRCMDTDGDGVLSMFELEYFYEEQCSRMEGMGIEPLPFTDLLCQMLDL
VKPESQGKITLSDLKRCRMAHIFFDTFFNLEKYLDHEQRDPFALQKDIDNECPEPSDWDK
YASEEYEILVAEETANEQLQEGTFDDDYEEAELPVQGEMVGNKMDKLLISDLSA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcaagctgctgtccccttctcacccatatttggtaatgatcaaccgccacgg
tatgaggacgttgttcagaaccctcctttacccaagagcagggatatactgccaccctcg
tcactcgctccagactcttctctctctttgtccactacgcctgagacagcagggagacat
aaggttcagaccaacgggctgcagcacacacacactctgtcacacacacactctctctca
ccgcacacacacacgttgtctgtttctacccctccatcccagacacacacaccttcatcg
caaatgcacactccgtcagcgcgcacacacactccgtccatctcccccatggaggctctc
ttcattgaggaggatgcagacctgggaagggggctgaacagggcttccagacacacacac
tcacacaccccgaccagaagcctcacacacactcacagtcggaacgggacagcttttagt
ccacacacaccccccagctccgcgcacacacacctcagccccaatctgtcacacgtacac
gttacacacacactccagtctgctggtgaagacctcacctgccccccaacctccgaacac
acccctcctgtcactcatagagacgacgacatcgacaggcttctgatggacttggagtgt
ctgtcgcagagcatgggtcgggagagagaccgagtcagagagggagagagagaaagagag
gcggagccccctctccccattaagaccagacagagggggacaggacaggggaacacctcc
ccacaaacccaaccctgtctccagacacaaacccaaatcaacccccaggctcaaaggcct
gttcctgttagccacctaaccgctaacgcccaggccactaggtcgacccccagctcgcct
gctcctctcctccaggcagagggcagcatggtggggctgggagatgaggaggacggggcc
ctgctgctgaggatcctggagagcattgagagctttgcccaggaactggtggactctggg
ggtagtcctgggaacactgggaagactgggactcagagcaaagagaaggaggtgatgaga
ctcctacaggacactctggctactgcagccaagactgacactctgacgcaggccaaacta
cctggatctccaccagcctggcaagatggacctgtacatgtgtctgcctccacaccaaca
cctgcacccagacttacagatggacctgttcctacggccctacctgtctctacagctccc
acacctgtccctgcccctatccccacaaccctagcagagtctgtctctacagctcccaca
cctgtccctgtccttgtccctgtccctgtccccacaaccctagcagagtctgtcgccaca
gaccaagttacaccttctaccctacccacacctgttccaccaccagcagtcgtacccaca
cctgttccaccacctacagtcgtacccacacctgttccaccacctacagtcgtatccaca
ccttcagaagcagccgctggacgtgaacatccacctgtagctgacctgacagctgtactt
accaccacggccacccctccaccggctgtaacacctgtcccctcccctgtcccgccccct
acacccacacctggagaggcacctgttgcaaccatcgctgctcctcctgttgccgtgaga
cacccggttgcccctagcaatgtggttgccctgagagacatcggctcgacactgctcatc
cagcagacgcctgaggtgatcagagtccagtccaacaagcaagataagaaatctggcacc
cctcctccagcccctctctccccactccctccgttcctccccccaccgctccccctctcc
tcccccactccagtcgtcctcacccctcctcctccccctcctccccctgccctcaacatt
ccccgcttctactaccctcgagggttaccaggggcaacaaaagtcaaccacgatgcggcc
atcactgccatagaaacagccttcactgagtttgaggaggagaaggctgatatttacgag
atgggcaagatcgctaaggcatgtggctgtcctctgtactggaaggcagccatgtttaac
ggagcaggaggagagaggaccggctttgtctctgttcactccttcatcgctacctggaga
aagttgttacatagttgctatgacgattcgtctaagtttatctacctcctggcgaagcct
ggctgttcctacctggaccaggaggacttcatacctttattacaggacatagtggacact
cacccaggactgacgttcttgaaggatgccccagaattccattcccgttacatcaccacc
gtgattcagcggatattctatgtggtcaaccgctcgtggacaggtcgcatcaccatgacg
gaactacgcaggagcaacttcctgcagaccctggccctgttggaagaagaggatgatatc
aaccagataacagattatttctcttatgagcatttctatgtgatctactgtaagttctgg
gagttggacacggaccacgacctttacattgaccctaaggacctggctcgttacaacgac
cacgcatcttcaagcagaatcattgagaggttgttctcaggagccgttacgcggggtagc
tcagtgcagagggaagggaggatgagttatgcagagttcagctggttcctcatctcagag
gaagacaagaaaaaccctaccagtatagagtactggttcaggtgtatggacacagatggg
gacggtgtgttgtccatgtttgagttggagtacttctatgaggagcagtgtagtaggatg
gaggggatgggcattgaacccctacccttcacagacctgctctgtcagatgctagacctt
gtcaaacctgaaagccaaggtaagataaccctgtctgatctgaagaggtgtaggatggct
catatattcttcgacacgttcttcaacctggagaaatacctggaccacgagcagagagac
cccttcgctttgcagaaggacatagacaatgagtgtccagagccttcagactgggataaa
tacgcttcagaggaatatgagatcctggtggcagaagagacagctaatgaacagctgcag
gaggggacatttgatgatgactatgaggaggcggagcttcctgttcaaggagagatggtt
gggaataagatggataagctgctcatatcagatctgtcagcatga
DBGET
integrated database retrieval system
