Oncorhynchus tshawytscha (Chinook salmon): 121846471
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Entry
121846471 CDS
T05605
Name
(RefSeq) DDB1- and CUL4-associated factor 4-like isoform X1
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
121846471
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
121846471
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-5_N
Motif
Other DBs
NCBI-GeneID:
121846471
NCBI-ProteinID:
XP_042177349
LinkDB
All DBs
Position
LG05:complement(8002870..8022422)
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AA seq
531 aa
AA seq
DB search
MRVKGRVLTWSRGCNVVAAIAGMKKGNWRDRGRDRRRLGYRSDWQRDRTQEQRYGSSEAG
PSYRDRTPENRSISNSAASSSSTAPELPGFYFDAEKNRYFRLLPGHNNCNPLTRGLLQER
EQEKHRARMITEDERPRKKAPRAGLNSALLLQKRHLGLLPGNSYSRLIHEVKVSGMRRHR
LEVQSSESSSPNTDHFRLIVGDSACERVFTVNDVSHGGCKYGIMNFRGCSRGSLSVKMCD
NLYFTNRKVNSICWASVTHSDSHVLLCLVGMAETPGCVSLLPASLFSNSNPDQPGMLCSF
KISTAWSCAWCLNPQADKTFSTGLSRRVIVTDAVTGRRQTYGIGSDVLAQQFALRAPVLF
NGCRSGEIFSIDLRQRGRRDHSWKACRFSQDSAITSVRILQDENYLLAADMIGEIKLWDV
RVTKPVRKYEGHHNQHAYLPLHVNEAEGLLMAVGQDCYTRLWSLGDGQLLRTIPSPHPAG
KDMIPSVVFSSQLGGNRGLPGLLMAVRHDLYYFPYNSDYQEGGGVVTEAAY
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagggttaaggggcgggtgttaacttggtcacgtgggtgcaacgttgtagcagcaata
gcagggatgaagaaagggaattggcgtgacaggggcagggaccgtaggcgactcggttac
cgctctgactggcaaagggacaggacacaggaacaaaggtatggcagcagtgaagcaggc
ccctcctacagagacaggaccccagagaataggtctatttctaatagtgcagcctcctcc
tcctccactgctccagagctgccggggttctactttgacgctgagaagaaccgttacttc
cggctgctgccgggccacaacaactgtaaccctctgaccagagggctgctgcaggagaga
gagcaggagaaacacagggccaggatgatcactgaggacgagaggcccaggaagaaagca
ccaagagcaggcctgaactcagctctgttgctgcagaaaagacacctgggtctgctacct
gggaactcttacagtaggctgatccatgaggtgaaggtgagtgggatgagacgtcacaga
ctggaggtccagagctctgaaagcagcagtcccaacacagaccactttagactcatagtg
ggtgactctgcatgtgagcgagtgttcacggttaacgacgtgtctcacggaggctgcaag
tacggcatcatgaacttcagaggctgcagcaggggctccctgtccgtcaagatgtgtgac
aacctctactttacaaacagaaaggtgaactctatctgctgggcctccgtcacccactct
gactcacacgtcctcctgtgtctggtgggcatggcagagactcctggctgtgtcagttta
ctaccagcctcgctcttcagcaactccaacccagaccagccggggatgctgtgtagtttt
aagatctctacagcctggtcctgtgcctggtgtctcaaccctcaggctgacaaaacattt
agcacgggtctgtctcgcagggtgatagtgacggacgcagtgacgggcaggagacagacc
tatggcatcggcagtgatgtgctggcacagcagtttgccctcagggctccagtcctgttt
aatggctgcaggtcaggagagatcttcagtatcgacctgcgtcagagaggcagacgggac
cacagctggaaggcctgcaggttctcccaggactctgctatcacctctgtacgaatacta
caggatgagaactacctactggccgcggacatgattggagagatcaagctgtgggatgta
cgagtaacaaaaccagtgcggaagtacgagggtcatcataaccaacacgcctacttaccc
ctccacgtcaacgaagctgagggactgctgatggctgtgggtcaggactgctacacccgt
ctgtggtctctgggggacggccagctcctgaggactatcccatctccccaccctgctgga
aaggacatgatccccagcgtggtcttctcttctcagctaggaggcaacagaggcctgcct
ggtctcctcatggctgtcaggcatgatctgtactacttcccttataacagtgactaccag
gagggaggaggagtagtgactgaggcagcctactag
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