Oncorhynchus tshawytscha (Chinook salmon): 121846766
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Entry
121846766 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: fanconi-associated nuclease 1-like
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121846766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
121846766
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
121846766
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
121846766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
MFS_3
Motif
Other DBs
NCBI-GeneID:
121846766
NCBI-ProteinID:
XP_042179957
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All DBs
Position
LG01:complement(7050825..7066551)
Genome browser
AA seq
1072 aa
AA seq
DB search
MAEKGNKRKQRSLSITKRKGYVGSKDGKKSANACPGTASISSFFNNAPPPRLPCPLCGQL
VPRFRINQHIDSQCQNFQREDGASIDTASACNIVTTTKLASSHSPSRRASKDHDPDTGPS
CPKEEKPQREANTSPYFKKSGASSSSQQVNTREMSSKTVVRPIDICSRLSSKLSRRGLKQ
RLKSPEDIQSQVDDIITIQESPERDKRSEELSSSQKENHLPQGFGDQTTCLMDTETTNVT
VESHSTISLGRPQVESREETLECLESKSESKLESLSPVVSMAPRPLSYAPSRLNKRKKGG
KAEVSVKTQRMSTRSKKDRCEKRDGEEPDDDLTRNKLLTSTTTTADDDKQHGTEESSTGN
CDTLLKSSTEVPEEEHQRRKVKLEEEGEQEQEESTVTGSSDQLTEPDTDRGTDKQDSDSP
RLPYYLGNFLTVLEAVLENEDDRMLFNQEDLSAIHGFERLSVTGQKLYVRLFQRKXKWLQ
VNKLNYNEISTDLGPVAQELVEGGFLQTDSDLQELGEVLDLLPAPELRSLAKTFHLGGPG
SGTQKHQLVEGLLKLSRQRSLFALAPGQNNIGTVILKRAKQLAGSCVRLHRGPRAVFSRV
LLLFSLTDGLEEEETAGGGQGQLYTILLVNSGRLAFPDYTVQRRAKLFLDREDLIRYEAA
MRALQEVITAMQTGHWEDALGLYTAAKTTWQETSKTYDLSHQEELPVFLRCFTTGWAYTR
ILSRGVEVLQRLRCYKEAVKELRSLLSQSVYCPDSRGRWWDRLALNLQQHLKLPEQAISS
IRDGLSDPLVRTGHQLSLHQRANRMKESPSYKNYHPVLSDLPTIHVNDVTHVTIRGQLFP
HEGGTGKNVFLMPAEEGAEGGYSTVMCSVEELSLAHYRRQGFDQGIHGEGSTFSTLFGLL
LWDVIFMEGIPDVFRNPYQPCPLDLFTDCFYGNRREAIETRVQVLCEASIETLHNLMAEA
WTDQEGKMCSLVNWERFSSLQRAQSLVSCLGGSFLGGMITRMAKDYRHCRAGLPDLVVWN
TSNNTYKLVEVKGPSDKLSQKQQIWLDELQRLGADVEVCHVTATGARGAWLE
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaagggaaacaaacgcaaacagagaagcctctcaataacgaagaggaaagga
tacgtcggtagtaaagatggtaagaaaagtgccaatgcatgtcctggtacagcctccatc
tcatcattcttcaacaacgccccgccacctagactgccatgtcctctgtgtggtcagcta
gtgccacggttcaggataaaccaacacattgactcacagtgtcagaactttcagagggaa
gatggtgcgtccattgatactgcttcagcctgtaacattgttactacaacaaagctggca
tcgtctcactctccttccaggagagccagtaaggaccatgatccagacacagggccttcc
tgtccaaaggaggaaaagcctcagcgagaggccaacaccagcccatactttaaaaagtct
ggtgcttcttcttcttctcagcaggtaaacaccagagagatgagcagtaagactgtagtc
aggcccattgacatatgtagcaggctgtcctctaagctctccaggaggggcttgaagcaa
aggctgaagtctcctgaggacatacagtcgcaggttgatgacatcatcaccatccaggag
tccccagagagagacaaaaggtctgaggagctgagcagctctcagaaggagaaccacctc
cctcagggatttggtgaccagacaacatgcttaatggacacagagacaacaaatgtcaca
gtggaaagtcacagtactatttcactgggcagacctcaggtagaaagcagagaagaaact
ttagaatgtttagaatccaaatctgaatctaaattagaatcattgtctccggtagtttct
atggccccgcgacctctgtcctatgctccatccagactgaacaagaggaagaaaggaggg
aaagcggaggtctctgttaaaacacagaggatgtctactcgcagcaagaaagacagatgt
gagaagagagatggtgaagaaccagatgatgacctcactagaaacaaactccttacgtca
acaacaacaacagctgatgatgataagcaacacggaacagaagaatcttcaactggtaac
tgtgacactcttttgaagagcagcacagaggtgcccgaggaggagcatcagagaagaaaa
gtaaaactagaggaagaaggagaacaagaacaagaagaatccacagtgaccggtagcagt
gatcagctgacagagcctgacacagacagaggaactgataagcaagattccgactcacca
cggttaccatactacctgggtaacttcctgaccgtgttagaggcagtgctggagaatgaa
gacgataggatgctgttcaatcaagaagacctttcagccatacacggctttgagcgtctg
tcagtgacaggacagaagctgtatgtgagactgttccagaggaaancgaagtggctccag
gtcaacaagctaaactataatgagattagcactgacctgggacctgtagctcaggagctg
gtggaaggaggtttcctacagacagatagtgacctccaggagcttggggaggtgctggac
ctgctgcctgccccggagctccgtagcctggctaagacgttccacttggggggtcctggg
tctggtacccagaaacatcagctggtggagggactcctgaagctgagcagacagaggtct
ctgtttgccctggcccctggacagaacaacattgggactgtcatactaaagagggcgaag
cagctagctggttcctgtgtacgtctgcatcgcggccccagggctgtgttctctcgcgtc
ctcctcctcttctccctgacagatggtctggaggaggaggagacggccggagggggtcag
ggtcagctctacaccatcctactggtcaactctggccgactggccttccctgactacacc
gtacagcgcagagccaaactgttcctggatagagaagatcttatcaggtacgaggcggcg
atgcgagcgctgcaagaggtgatcacagccatgcagacaggccactgggaggacgctctg
ggactttacactgcagccaagacgacctggcaggagacgagcaagacgtacgacctcagc
caccaggaagagctgccagtgttcctgcgctgtttcaccacaggttgggcctacacacgc
atcctgtccaggggagtagaagtactgcagagattacgttgctacaaggaagcggtgaag
gagctgcgctcactattgtcccagtcagtctactgtccagacagcagggggcgatggtgg
gacagactggcactcaatctccagcagcacctcaaactacctgaacaggctatcagctcc
atcagagacggtctctctgaccccttggtgaggacaggccaccagctttcactccaccag
agagccaataggatgaaggaatcccctagctacaagaattaccaccctgtactcagtgac
ctgcctaccatccacgtcaacgatgtcactcatgtcactatccgagggcagctcttcccc
cacgagggggggacagggaagaatgtgttcctcatgcctgctgaggagggggcagaggga
ggatactccactgtcatgtgttctgtggaagagctgtcactggcacactaccgtcggcaa
ggctttgaccaagggatccatggagagggctccacgttttccactctgtttggtcttctg
ttatgggacgtcattttcatggagggtattccagacgtcttccggaatccctaccagccc
tgcccactggacctcttcacagactgtttctatgggaaccggagagaggcgatagagacg
cgtgtgcaggtgctctgtgaggcgtccattgagacgctgcacaacctgatggctgaggcc
tggaccgatcaggaggggaagatgtgttcactggtcaactgggagcgcttctcatccctg
cagcgggcacagagtctagtgtcttgtctgggtggatcgtttctgggagggatgatcact
aggatggccaaggactacagacactgtcgagcaggactgcctgacctagtggtgtggaac
acatccaacaacacctacaagctggtggaggtgaagggccctagcgacaaactgtcccag
aagcaacagatctggttggatgagctacagagactgggggctgatgtagaggtttgtcac
gtcactgccaccggggccagaggagcttggctggaatag
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