Oncorhynchus tshawytscha (Chinook salmon): 121846945
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Entry
121846945 CDS
T05605
Symbol
glra1
Name
(RefSeq) glycine receptor subunit alphaZ1
KO
K05193
glycine receptor alpha-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121846945 (glra1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121846945 (glra1)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
121846945 (glra1)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121846945 (glra1)
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glycine
121846945 (glra1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121846945
NCBI-ProteinID:
XP_042182012
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All DBs
Position
LG08:complement(82240811..82357823)
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AA seq
476 aa
AA seq
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MRPAKMYRINALGIYLWETIVFFSLAASKEAAARKAASPMPPSEFLDKLMGKVSGYDARI
RPNFKVAGVPASGRDPQGPKTEASHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQ
QWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNV
LYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQ
FILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINM
DAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF
IARQHKELLRFRRRRRHMKEDEGGEGRFSFTAYGMGPACLQAKDGMAIKGNNNNAPTATA
GPQEKTVEEMRKLFIGRAKRIDTVSRVAFPLVFLIFNIFYWLVYKIIRSTDVHQMT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagaccggcaaaaatgtatcgaataaacgctctcgggatctatttgtgggaaacaata
gtatttttcagcttggcagcctctaaagaagccgcggctcgaaaagctgcctccccaatg
cctccctctgagttcctggacaaactcatgggcaaagtttcgggttacgatgcaagaatc
agacctaatttcaaagttgcaggggtccccgcgagtggaagagacccacaaggccccaaa
acagaagcttctcacaagaaaggtccccctgtaaacgtaacgtgcaacatttttattaac
agttttgggtccatcgctgaaacaacaatggactacagagtgaatatcttcctgaggcag
caatggaatgaccccaggctggcctatagtgaataccccgatgactctctcgacctggac
ccgtctatgttggactcgatctggaaacctgatttgttcttcgccaacgaaaaaggcgcc
aatttccatgaggttacgactgacaacaaactactaaggatttcaaaaaatgggaacgta
ttgtatagtattcgaataacactggtcctggcctgtcccatggacttgaagaacttccca
atggacgtacagacctgtatcatgcagctggagagtttcggctatacgatgaatgatctc
atatttgagtgggatgagaagggagccgtgcaggtcgcagacgggctgacgttacctcag
tttatactgaaagaggagaaagacctgcgatactgtaccaagcactacaacacaggaaag
ttcacttgtatcgaggctcgtttccatctggagaggcagatgggctattacctgattcag
atgtacatccccagccttctgattgtcattttgtcctgggtgtccttctggatcaacatg
gacgctgcacctgccagagtgggactgggcattaccaccgtgctcactatgaccacccag
agctccggctcccgagcctccctccccaaggtgtcgtatgtgaaagccattgacatctgg
atggccgtgtgcctcctgtttgtcttctcggccctgcttgagtacgctgctgtgaacttc
atcgctcggcaacacaaggaactgctgcgcttcaggagaaggaggcgacacatgaaggag
gatgagggcggtgagggccggttcagcttcaccgcctatggcatgggccctgcctgcctg
caggccaaagatggcatggccatcaaagggaacaacaacaacgccccgaccgccactgcc
ggccctcaggagaaaacagtggaagagatgcgcaagctcttcatcggccgcgcgaagagg
atcgacacggtctctcgcgtggctttcccgctagtcttcctcatttttaatattttctac
tggctcgtatacaagatcatccgaagcacggatgtacaccagatgacgtaa
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