Oncorhynchus tshawytscha (Chinook salmon): 121847264
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Entry
121847264 CDS
T05605
Name
(RefSeq) nucleolar transcription factor 1-like
KO
K09273
upstream-binding transcription factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
121847264
03021 Transcription machinery [BR:
otw03021
]
121847264
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
121847264
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
121847264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121847264
NCBI-ProteinID:
XP_042183768
LinkDB
All DBs
Position
LG09:85568269..85586707
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AA seq
745 aa
AA seq
DB search
MNGEMDSSTKDQVWTQDDLLNLLEAMKVNLPQKDLAKYKTSESHLDWEKVAFNSFTGEMC
KQKWNEVSKVIRKFRTLTELIFDAQDFIKNPYKGKKLKKHPDFPKKPLTPYFRFFIEKRA
KYAKLHPEMSNLDLTKILSMKYRGLPDKKKKKYLEDFQKDKETFGHSMSKFREDHPDLVE
SMAKKGSNVPEKPRTPQQLWYSHEKKAFLKTHADATTKDIKDSLGKQWTQLSDKKRLKWI
AKSLEMHKAYEEVMKGFIETHPELNMSNEDIVKSTLTKAERHLKDKSDGRPDKPPPNGYS
MFCAELMSSMKDVPSTERMVMCSQQWKLLKQNEKDGYQKRCEQRKKEYEVEMNRFLCSIS
EEEQQRVLGEQKMIGFKKGSGGSKKKSRAKPSPEKPKRPISAMFIFSEEKRPKLQQERPD
LSDSELTRLLARMWNELSDKKKEKYKRLETVLKAESVKKGQEERSRLPDTPKTAQDIWQQ
SVIGDYLARFKNDRPKAQKAMEATWNTMEKKEKIMWIKKAAEDQKRYERELSEMRSPATI
IASGKKMKFDGEPKKNPIVSVFLMENGYQKFSQEMLSNGELNHLPMKERMGEIGGRWQRQ
PQKEKDRYKKIAEEKQKLYKVELERWLASLSSQERNVYKEYNSQKRKTPVKPGGTAAKVK
AKVTKKSDTEDEDDDDEEEEKEAASSDNDSSSAEDSEEEDDDDDDNEEDDDDDDDDEAED
KENKSEGSSSSSDSSSVETSDSDSD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaaatggactcgtccactaaagaccaagtgtggacgcaggacgaccttctg
aatctgctggaggccatgaaagtaaatcttccccagaaggacctggccaagtacaagacg
tcggagtcccatctggactgggagaaggtggccttcaactcattcacaggagagatgtgc
aaacagaagtggaacgaggtctccaaagtgatccgtaaatttcgcacattaacagagctg
atttttgatgcccaagacttcatcaagaacccttataagggcaagaagctgaagaagcat
ccagatttccctaaaaagcccctgacgccatatttccgcttcttcattgagaagagggcc
aagtatgccaagctgcaccctgagatgagcaacctagacctcaccaagatcctctccatg
aagtacagagggctgcctgacaaaaagaagaaaaaatatctagaagacttccagaaagac
aaagaaacgtttgggcacagcatgtcaaagttcagggaggaccatcccgacctggtggag
agcatggcaaagaaaggttctaatgtgccagagaaacccaggacgcctcagcagctatgg
tacagtcacgagaagaaggccttcctcaaaacacacgcagatgcgaccaccaaagacatt
aaagacagtcttgggaagcagtggacacagctgtcagacaaaaagagactcaagtggatt
gccaagtccctggagatgcacaaagcatatgaggaggtgatgaagggcttcattgagact
cacccagagctcaacatgagcaacgaggacatcgtcaagtccaccctcaccaaggctgag
agacatctgaaggacaaatctgatggcaggccagacaaaccacccccgaatggttactcc
atgttctgtgctgagttgatgtccagtatgaaggatgtgcccagtacagagcgcatggtc
atgtgcagccagcagtggaagctgctgaaacagaacgagaaggacggctaccagaaacgc
tgcgagcagagaaagaaagaatacgaagtcgagatgaaccggtttctttgtagtatatca
gaggaggagcagcagcgtgtgctgggggagcagaagatgattggctttaagaagggcagc
gggggcagcaaaaagaagagcagagcaaagcctagcccagagaagcccaaaaggcccatc
tcggccatgttcatcttctctgaagagaaacgacccaagctgcagcaagagcgaccagac
ctgtctgacagtgagctcaccaggctgctggcacgcatgtggaacgagctctcagataag
aagaaggagaagtacaagcgtcttgagacggtcctgaaggcagagtctgtgaagaaggga
caagaggagcgcagccggctgccagacacccccaagactgcacaggacatctggcagcag
agtgtcataggagactacctggccaggttcaagaacgaccggccaaaagcccagaaagcc
atggaagccacttggaacaccatggagaagaaggagaagatcatgtggattaagaaggca
gctgaggaccagaaacgatacgagagggagctgagtgagatgcgctctcctgcaaccatc
attgcctcagggaagaagatgaaatttgacggtgaacccaagaaaaaccccatcgtgagt
gtatttctgatggagaatggctaccagaagttctctcaggagatgctgtccaacggagag
ctgaaccacctccctatgaaggagcgcatgggggagatcgggggccgctggcagaggcag
ccccagaaggagaaggaccgctacaaaaagatagctgaggagaaacagaagctgtacaaa
gtagagctggagcggtggctggcgagcttgtcctcacaagaaagaaatgtgtacaaggag
tacaactcacaaaaaagaaaaaccccagtgaaaccaggaggcactgcagccaaagttaag
gccaaggtaaccaagaagtctgacacagaggatgaagatgatgatgacgaggaggaagag
aaggaggctgcctcatcagataacgattcttccagtgcagaggacagtgaggaggaagat
gatgatgatgatgataatgaggaagacgacgatgatgacgatgatgatgaggcggaggat
aaagagaacaagtcagaggggagtagtagcagcagtgattcgagctcagtggagacatcg
gactctgattcagactga
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