Oncorhynchus tshawytscha (Chinook salmon): 121847498
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Entry
121847498 CDS
T05605
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
121847498
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
121847498
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
121847498
NCBI-ProteinID:
XP_042184920
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Position
LG10:complement(71501062..71567053)
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AA seq
1167 aa
AA seq
DB search
MDKNEVSPGSSAATMKKKAAGGSGCSHISAPKAATSNCTRSKSSNCVESVPAAAASQSAP
NVKQPGVASNAVIDGAEDGEDESKFQYPRLRRTGGSGSGGGGGGGSIRMKNFTPGGGAAA
TATRKNSTNNEPILLQTEGAPAATKPTVASKATDTTTCPGDAAGRCETNRAAGAEASGAA
VAVEVLNATAGDACNNSTAPISRMKCNKNGECRRDSGTGSLRSIISNKTAGAGRAEDASL
RRGACNSARASMDGSATGSMTQGQGEGSANPSVTPVSTGVPEKKDSRVSFSNAPSRKASS
SLHGSTQTQTTQQPRNSVTFQKPEDGPQIQAEDADADGSTFMQRQFSAMLQPGVNKFSLR
MYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIVIPVGITFFNDGTT
TPWIIFNVISDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKTYLKTWFIVDFVSSIPV
DYIFLIVEKGIDSEMYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLA
SAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPQDCWVSLNKMVNDTWSELYSFAVFKA
MSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQEKYK
QVEQYMSFHKLPSDFRQKIHDYYEHRYQGKMFDEDSILEELNEPLREEIVNFNCRKLVAS
MPLFANAEPNFVTAMLIMLRFEVFQPRDYIIREGTIGKKMYFIQHGVCNVITKGTLGMKL
SDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLD
RIGKKNSILMHKVQHDLNSGVFNNHENEMIQEIVKYDREMVKLVDLQRPRTMSMTSSVPG
GMFSPAGPSGVGALASLQQAVAMSFCPQGMGPMAGSGTLQSPRMLRRFQVVHSLSQSPVS
ASPLQSQPPQMAHATGVFGSAISSPPVQSPLAHPGRTFQYMGGAGPSGSQLSLVQHHVPS
PTHTIQRPSSQKSTHSLHSGTLSQDARVLSASQLSLPQDGTPPAGPSPPQSTHPSTHASS
TSIGPPQPTHPSQPGPSGVGVQVGGRPAGVPQRVAFASTPPPGGAPGMGAAAAAAGSGLP
APGAPKKDSIVSIPELDSARNRLSSNL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaatgaggtttcaccaggctcatctgctgcgaccatgaaaaagaaggcggca
ggcggtagcggatgtagccacatcagcgcgcccaaagctgccacgtccaattgtacgaga
agcaaaagcagcaattgtgttgagtctgtccccgctgcagctgccagccagagcgccccg
aatgtgaagcagcccggcgtggccagtaacgctgtcatagacggtgcggaggacggtgag
gacgagtccaagtttcagtatccgcggctgcgccgaaccggggggagcggcagtggcggt
ggtggtggaggcggtagtatcaggatgaagaactttacgccaggagggggagccgcggcc
acggctaccagaaagaactccaccaacaacgagcccatcctactgcaaacagagggtgcg
cctgctgctactaagcccactgtagcatccaaagcgactgataccacaacctgtccggga
gatgctgccgggcgctgcgagaccaacagagcggcaggggcggaggcgtctggagcagcg
gtcgcagtagaggttttaaacgcgacagcaggtgatgcttgtaacaacagcaccgctcca
atttcaagaatgaaatgcaacaaaaacggagaatgcaggagggactccggcaccgggagc
ctgcgctcgatcatctccaacaagactgccggggcggggagggccgaggacgcgtccctt
aggcgtggtgcctgtaactcagccagggccagcatggatggctccgcgacaggctccatg
acgcagggccagggggaaggtagcgcaaaccccagcgtcacccctgtttccaccggcgtc
cccgagaaaaaggactccagggtgtccttctccaacgcgccaagcaggaaagcctcctca
tcgctgcacggatcgacccagacccagacgacccagcagcctagaaactctgtcaccttc
cagaagccggaggatggaccccagatccaggccgaggatgccgatgctgacggaagcacc
ttcatgcaacgacaattcagtgccatgctgcagcctggagttaacaaattctccttacgc
atgtatgggagtcaaaaggcggtggagagggagcaagagcgggttaaatcagcgggcaat
tggattatccacccctacagtgatttcaggttctactgggatttcacaatgcttctcttc
atggtgggtaacctgattgtcatcccggtgggcatcaccttcttcaacgatgggacgacc
accccctggatcatcttcaacgtcatctccgacaccttcttcctcatggacctggtcctc
aacttccgcactggcatcatcatcgaggacaactctgacatcatcctggaccccaagacc
atcaagaagacgtacctgaagacctggttcatcgtggactttgtctcctccatccccgtg
gattatatcttcctgatcgtggagaaggggatcgactctgagatgtataagacggccagg
gccctgaggatcgtgcgcttcactaagatcctgagcctgctgaggctgctgaggctgtcc
cggctcatccgctacatccaccagtgggaagagatcttccatatgacctatgacctggcc
agtgcagtaatgcgtatcttcaacctgattggtatgatgctgctgctgtgtcactgggat
ggctgtctgcaattcctggttcccatgctgcaggacttcccccaggactgctgggtctcc
ctcaacaagatggtgaatgacacatggtctgagctgtattcatttgcagtgttcaaggca
atgagccacatgttgtgtatcggctacggtcggcaggccccggagagcctgtctgatatc
tggctcaccatgctcagcatgatcgtaggggccacctgctacgctgtgttcataggccat
gccactgcactcatccagtccctggactcgtcccgacgacagtaccaggagaagtacaaa
caagtggagcagtacatgtccttccacaagctgccatccgacttcagacagaaaatccat
gactattatgagcaccggtaccaggggaagatgtttgatgaagacagcatcctagaggaa
ctgaacgaaccactcagagaggaaattgtcaatttcaactgccgtaagctggtggcgtcc
atgccgctgttcgccaacgcagagcccaactttgtgacagccatgctgatcatgctccgc
tttgaggtcttccagcctcgtgattacatcatcagagagggcaccattggcaagaagatg
tactttatccagcacggagtctgtaacgttatcaccaagggaaccctgggaatgaagctc
tctgatggatcctactttggagagatctgtttgctgacgcggggtcggcgtacggccagc
gtcagagcggagacatactgccgtctctactccctgtctgtggacaactttaatgaggtg
ctagaggagtatcccatgatgagacgggcctttgagaccgtggccattgaccgactggac
cgcataggcaagaagaactccattctgatgcacaaagtgcagcacgacctcaactccggc
gttttcaacaaccatgagaatgagatgatccaggagattgttaagtacgaccgtgagatg
gtcaaactagtggaccttcagagaccccgcaccatgtccatgacatcctccgtccctggg
ggcatgttctcccccgcaggcccatccggagtcggggccctcgccagtctccagcaggct
gtggccatgagcttctgcccccaggggatggggccgatggcagggtcagggacgctgcag
tccccccgtatgttgcggaggttccaggtggtccatagcctgtcacagagccctgtttcc
gcatctcctctccagtcccagccaccacagatggctcatgcaacaggagtgtttgggtcg
gctatttccagcccaccagtccagagccctctggcgcatccaggacggacattccagtac
atggggggagcggggccgtctgggtctcagctgtccctggtgcagcaccacgttcccagc
cccacgcacaccatccagaggccctcctcacagaaaagcacccactcgctccactcaggc
acccttagccaagatgcccgtgtcctctccgcctcccagctctccctccctcaggatgga
acccctcctgccggccccagccctccccaatctacccacccatccacccatgcctcctcc
acctccattggcccccctcagcccactcaccccagccagcctgggccctctggggtgggg
gtccaggttggggggagacccgcgggagttccacagcgggtggccttcgcctccactcct
cccccaggaggagcacccgggatgggggcggctgcagcggcggctgggtcggggctcccg
gcccctggagctcctaagaaggattcgatcgttagcataccggagttagactcagcccgg
aaccggctgtcttccaacttgtga
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