Oncorhynchus tshawytscha (Chinook salmon): 121847761
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Entry
121847761 CDS
T05605
Symbol
wdr32
Name
(RefSeq) DDB1- and CUL4-associated factor 10 isoform X1
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
121847761 (wdr32)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121847761 (wdr32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_like
Beta-prop_VPS8
RMC1_N
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
121847761
NCBI-ProteinID:
XP_042186309
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Position
LG11:54511006..54538874
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AA seq
541 aa
AA seq
DB search
MSSEQQSDSVDPDESQDTSSSRVSDKEQDPQTDDSADEGKTPARPPQSSREDSSLHPRSS
RADSAAAQDNPRCQPNVQGASGQGRGTSMAGPGSVETSSNSLFSMLQSRTIRRGLFVDPS
RDNFRTMTNLYSSMSPAADSVNLSTQTHGAVFNLEYSPDGSVLTVACEQTEVLLFDPISS
KHIKTLVEAHEDCVNNIRFLDNRLFATCSDDTTIALWDLRKLNSKVCSLHGHASWVKNIE
YDTNTRLLVTSGFDGNVITWDTNRFTEDGCPHKKFFHTRYLMRMRLTPDCSKMLISTSSG
YLLILHDLDLTQSLEVGSYRMLRARRTPLSSDGSASASRSSGAPRQGNDSSKIHPHREGL
SPRNSLEVLTPEIPGERDRGNCITSLQLHPKGWAALIRCSSNMDDQEVSHLTPQNPQEWT
CVYEFQDGSPTRPPVSPRCSLRLTHYIEEANVGRGYIKELCFSPDGRLICSPYGYGVRLL
SFDENCMELTDCLPVQTSCLREVRSIYSHSDVVLTTKFSPTHCQLASGCLSGRVALYQPR
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggagcagcagagcgacagcgtggatccggatgagtcgcaggacacgtccagc
agccgggtgtcggacaaggaacaggacccgcagacagatgattccgccgatgaaggcaag
acaccggcgcgtcctccgcagagcagccgagaggacagtagtcttcacccgagaagctcc
agggcggattctgcagccgcgcaggacaatccccggtgtcagccgaatgtacaaggcgcc
tcggggcaagggaggggtacctctatggctggccctggttcggttgagactagctccaac
agcctgttctccatgctacagagcaggactataaggagagggctgttcgtggatccatct
agagataactttaggacaatgacgaacttgtattcttccatgagtccggctgcagactcg
gtcaatctcagtacccaaactcatggcgcagtgttcaatctggaatactcccccgacggg
tctgtcctgacagtggcctgtgaacagacggaggttctcctgttcgatcccatctcttcc
aagcacatcaagaccctggtggaggctcatgaagactgtgtcaataacatcaggtttctg
gacaaccgtttgtttgccacgtgttctgatgacaccaccatagctctgtgggacctgagg
aagctcaactctaaagtgtgctctttgcacggtcacgccagctgggtcaagaacatagag
tacgacaccaacacacgactcctcgtcacctctggctttgacggaaacgtcatcacctgg
gacaccaacaggtttacagaggatggctgcccccacaagaagttcttccacacgcgctac
ctgatgagaatgcgtctgactccagactgttccaagatgttgatctccacttcatctggc
tacctgctgatccttcatgacctggacctcacacagtctctggaggtgggcagctaccgt
atgctgcgggccagacgcacccccctcagctcagatggctcagcgtctgcgtcgaggtca
agtggagctcctcgacagggtaacgactccagcaagatccaccctcacagagaaggtctc
tcccccaggaatagtttggaggtgttgactccagagatcccaggagagagggacaggggg
aactgcatcacctctctccagcttcaccctaaaggctgggctgccctcatacgctgctcc
tccaacatggatgaccaggaggtgagtcacctgaccccccaaaacccccaggagtggaca
tgtgtgtatgagttccaggatggttcccctacacgtccccccgtctccccgcgctgctct
ctacgtctgacccactacattgaggaggctaacgtggggaggggctacatcaaggagttg
tgcttcagtcctgacgggcggctcatctgctccccctacgggtacggagtacgactgctg
tccttcgacgagaactgtatggaactgactgactgccttcccgtacagaccagctgtctc
cgagaggtgcggtccatctactcccatagtgatgtggtcctcaccaccaagttctcccca
acccactgccagctggcgtcaggctgtctcagtggccgcgtcgccttataccagcccagg
ttctaa
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