Oncorhynchus tshawytscha (Chinook salmon): 121847864
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Entry
121847864 CDS
T05605
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 2-like
KO
K03260
translation initiation factor 4G
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
121847864
03012 Translation factors [BR:
otw03012
]
121847864
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121847864
mRNA cycle factors
Stress granule specific factors
121847864
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-4
121847864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
W2
MA3
Glyco_hydro_106
Motif
Other DBs
NCBI-GeneID:
121847864
NCBI-ProteinID:
XP_042187043
LinkDB
All DBs
Position
LG12:complement(64790953..64839701)
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AA seq
949 aa
AA seq
DB search
MQLSSRTERRTYKAAGPDSDWVLHKMKELPENMEDQILLLLQPLLLFSGIHRCQAAKVES
VIAEGGASRFSASSGGGGGRGASQYHPKTVGNSEFLGKAPGSSVQRWVPSRSTRRDANAS
NEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVDSKLVLKGVILLIVDKALEEPKY
SSLYAQLCLRLAEDAPNFDGPSPEIQTSQKQSTTFRRLLISKLQDEFENRARNVEIYDKH
DNPLTSEEEEQHAIAKFKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMG
EDLECLCQIMRTVGPRLDHEKARSLMDQYFGRMKSLMNNKDLPARIRFLVQDSVELRENN
WVARKAFIDNGPKTINQIRQEAVKDFGVFIPPMAQGMRTDFFLEGPFMPRLKLDRETLGG
LADMFGQMPGSGIGTGPGVIQDRYSPTMGRHRTNPLFNGHTAPATQSQFEMGGKPFIKSN
QGQNPIFQNQQQQAQSKDMAPRFIKKGSLNADEISLRPAQSFLLNTNQVPKLQPQIPTMI
SPSAQPPRTQTPPLGQPPLLGLKTNPPPIQEKPPKTTKKPPPAKEELLKMTETIVTDYLN
SKNIDEAVNSVREMKAPKHFLPEMLSKIVICSLDCPDEDKEHASTLIHTLRTEGLVTGES
FMRAFLSVLDQCPKIEVDIPLVKSYLAQFAARAIIAELVSMDELAHPLENGTHFPLFLLC
LQQTAKLKDREWLTDLFQQSKVNMQKMLPEIDQNKDRMLEILEGKGLSFLFPLMKLEKEL
LKQIKADPSPQCIYKWIKDNISPKLHTDKGFVNILMTNFLQYIAQEINASEEEDQLSAPT
KEQLDQEKQLLLAFKPVMQKFLHDHQDLQVGALYALQVHCNAKTFPKGMLLRYFVHFYDM
EIIEEEAFLAWKEDITQEFPGKGKALFQVNQWLTWLETAEEEESEEEAD
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgagcagcagaacggagaggcggacatataaggctgctggacctgacagcgac
tgggtccttcacaagatgaaggagctgccagagaacatggaggaccagatattactctta
ctacagcctctgctgttattttcgggaattcatcgttgtcaagccgccaaagtggagagt
gtgattgcagaagggggtgcttctcgtttcagtgcttcttcgggtgggggaggaggtagg
ggtgcctctcagtaccatcccaagactgtcggcaacagcgagttcctggggaaagcccca
ggatctagcgttcagagatgggttccttcacgaagcactagacgagatgccaatgcctcc
aatgaaaaagaacgacatgatgcaatctttaggaaagtgagaggcatacttaataaactg
acccccgagaagtttgacaagctatgccttgagctcctgaatgtgggcgtagattcaaaa
ctcgtcctaaaaggagtgatcttgctgattgttgacaaagccctcgaagagcccaagtat
agctcgctttatgctcagctatgtctgcgcttggcagaggacgcaccgaactttgacggc
ccatcgccagagatccaaacgtcacaaaaacaaagcaccacattcaggagacttttgatt
tctaagcttcaagatgaatttgagaaccgcgccagaaatgttgaaatctatgacaaacat
gacaaccctcttacctctgaggaagaagagcagcatgccattgccaagtttaagatgctg
ggaaatatcaaattcattggggaacttggcaaactcgatcttatccatgaatctatcctt
cataagtgcatcaaaacacttttggaaaagaagaagagagtccaacttaaagatatgggg
gaagatttggagtgcctctgtcagataatgagaacagtggggcctagactcgatcatgaa
aaggctaggtctttaatggatcagtactttggccgtatgaaatccttaatgaacaacaag
gacttgccggcaaggattcgtttcctggtgcaggactcagtggagttgcgagagaacaat
tgggtggctcgcaaagcttttatcgataatggaccaaagacgattaaccagattcgtcag
gaagcagtaaaagattttggtgtttttattccaccaatggcccagggaatgagaactgac
ttctttttggaggggcccttcatgcctaggttgaaacttgacagggaaactcttggcggg
ttggcggatatgtttggacagatgccagggagtgggatcggcacaggccctggagtgatt
caggaccggtattcgcccaccatgggccgtcaccgcaccaacccactcttcaacgggcac
acagcccctgctacccagtctcagtttgagatgggaggcaagcccttcatcaaatctaac
caggggcagaatccaattttccagaaccagcaacagcaggctcagtctaaggacatggca
ccgcgtttcatcaagaaaggatcgctcaacgctgatgagatcagtctaaggccggcacag
tcattccttctcaacacaaaccaagtgccaaagttgcagccgcagataccaacaatgatt
tctccaagtgctcaacctccacgcactcaaaccccaccactgggacagcctcctctgctt
ggtctgaaaaccaaccctcctccaattcaggaaaaacctccaaagaccaccaagaaaccg
cctcctgcaaaggaagagttgcttaagatgaccgagaccatagtgaccgattacctgaac
agcaaaaacattgatgaagctgtgaacagtgtaagagagatgaaggctcccaaacacttc
ctgcctgagatgttgagcaagatcgtgatctgttctcttgactgcccagacgaagacaag
gagcatgccagcaccttgatccacacactccgcacagagggccttgttactggggagagc
ttcatgcgggcttttctcagtgttctggaccagtgtcccaagatcgaagtggacattcct
ctggtgaagtcctacttggcccagtttgcagcgcgagccatcatcgcagagctggtgagc
atggacgagctagcccaccctctggagaatggcacccactttcccctcttcctgctttgt
ctgcaacagactgccaagctgaaggatcgtgagtggctcactgatctattccagcaaagc
aaggtcaacatgcagaagatgctgcctgaaatcgaccaaaacaaggatcgcatgctggag
atcttggagggcaaaggcctgagcttcttattcccactcatgaagctggaaaaggaactg
ctgaagcagatcaaagcagacccctctccccagtgcatttacaagtggatcaaggacaac
atctcccctaagctccacaccgacaagggcttcgtcaacatcctcatgaccaatttcttg
cagtacattgcccaagagataaatgccagtgaggaagaagaccagttatcagcccctact
aaagaacagctggaccaggagaagcagctgctgctggccttcaagccagtgatgcagaag
ttcctgcatgatcaccaggatctgcaagtcggtgccctctacgcactgcaggtccactgc
aatgctaaaactttccctaaaggaatgttactgcgctattttgtccacttctatgatatg
gaaatcattgaagaagaagccttccttgcatggaaagaagacataactcaagagtttcct
gggaaggggaaagcattattccaggtgaaccagtggctgacctggctggagactgctgag
gaagaggagtctgaggaggaagctgactga
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