Oligella ureolytica: I6G29_02235
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Entry
I6G29_02235 CDS
T07321
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
oue
Oligella ureolytica
Pathway
oue03030
DNA replication
oue03430
Mismatch repair
oue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6G29_02235 (dnaE)
03430 Mismatch repair
I6G29_02235 (dnaE)
03440 Homologous recombination
I6G29_02235 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oue03032
]
I6G29_02235 (dnaE)
03400 DNA repair and recombination proteins [BR:
oue03400
]
I6G29_02235 (dnaE)
Enzymes [BR:
oue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6G29_02235 (dnaE)
DNA replication proteins [BR:
oue03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6G29_02235 (dnaE)
DNA repair and recombination proteins [BR:
oue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6G29_02235 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QPT40450
UniProt:
A0A378XE07
LinkDB
All DBs
Position
complement(407262..410804)
Genome browser
AA seq
1180 aa
AA seq
DB search
MSDTMLAAADSSAAEVQSTPAFVHLRTHSEYSVVDGTIRIGELIKQAKQFNQPALALSDL
GNLFGYIKFYRAARGAGIKPIAACDFWIDNPDDEKKPFRCLLIARNHNGYLQLCELISKS
WIDNAQIDRGQLKPAWLEKPEDTDGLILLSGARQGDIGQALEVGRFEQAVRIAERWAKYF
PNRFYIELQRAGFDGDERYVQEALKVAQQTGLPVVATHPVQFLTPDDFDIHEVRVCIAHG
EVLANQHRPKRFNPQQYYLSSEEMLKKFSDIPSATINAVEIAKRCNLTIELGTPNLPDFE
TPEGMTLGEYLIELSHKGLDGRLEFLYPDPEERAKQDPVYRERLDLECKIIIDMGFPGYF
LIVQDFINWGKSNGVPVGPGRGSGAGSLVAYSLGITDLDPIRYDLLFERFLNPERVSMPD
FDIDFCQDKREKVIEYVKEKYGRAAVSQIATFGTLGAKAVVRDVGRVLEMPYSLCDGLSK
LIPFNPAKPWSLSDAMEGEPEFKRRYDDDEEVRSIVDSSLPLEGLVRNVGMHAGGVLIAP
GKLTDFCPLYCQPGHSGSVVSQYDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVQRFNQG
QEAFDIMAVPLDDKATYDLLSEGNTTAVFQLESRGMKELLRKLLPSTFEDVIAVLALFRP
GPLDSGMVDDFVNRKHGRAEVDYFHEDLTSTLDSTYGVIVYQEQVMLISQIIGGYSLGGA
DLLRRAMGKKKPEEMAEHRKLFEAGAIKKGYDGEMAKNLFDLMEKFAGYGFNKSHSAAYA
LISYQTAWLKKYYPAEFMAATLSSDMDDTDKIQIFWRDSLDNGLTVLPVDINHSQYRFEP
VPDKHLEEKGSIRTIRFGMGGVKGVGESAIENILAARNSDGPFVDLYDFCSRIDRHTVNK
RAMEALIRAGAFDSIETNRRALLESLPMAIDAAEQNDRNANQVSLFGDDSGDIVAHEIQS
IKPWTLYDMLIEEKKALGFYFSHHLFDVWRDEVRRFAPAPLANLKESRSTQWVAGVLIAT
RAFQLKDKDDRLYFLLIDDGSAQIEVTCDSHLYESCRHLFNVDDLLLVEARVSRSKFNNT
LRINANAFYNLQSARESVAKDLSVVLTEPIPAKQLHVLMNPYRAEPENGFHGVAVRFLYH
PTTHISCEIQLGEEWRVRLNPQFLEGLAARAEIASFEVNY
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataccatgcttgccgctgcagatagcagcgcggctgaagttcaatccaccccg
gcctttgtgcatcttagaacccattcagagtattcagtcgtcgacggtacgattcgaata
ggggaattgattaagcaagcgaagcaatttaatcaaccggcgttggctctgtcggattta
ggtaatttatttggctacattaagttttatcgagcagcgcgtggagccggtattaagcca
attgcagcgtgtgatttctggattgataatccggatgatgagaaaaagccttttcgttgc
ctcttaattgctcgcaatcacaatggctatttgcaactgtgtgagcttatctctaagtcg
tggattgataatgcccaaatcgatcgcggtcagttgaagccggcgtggttagaaaagcct
gaagatacggatggcctgattctgttgtcaggtgcccgtcagggtgatattggtcaagcg
ctggaggtcggacgcttcgagcaggcggtgagaattgccgaacgttgggctaagtatttc
cctaatcgattttatattgaattacagcgggcaggttttgatggcgatgagcgttatgtt
caagaagcccttaaagtcgcccaacaaacagggctaccggtcgtcgctacacaccccgtg
cagtttttaacccctgatgactttgatattcatgaggtgcgtgtctgtattgcccatggt
gaagtactggcaaatcaacatcgtcctaagcgttttaatcctcagcaatattacttaagc
tccgaagagatgctgaaaaaattcagcgatatcccttcagcgacgattaacgccgtagag
attgctaagcgctgtaatttaaccattgaattaggtacgcctaatttaccggactttgaa
accccggaggggatgacgctgggtgaatatttaattgagctgtcacacaagggcttagat
gggcggttagagtttctttatccggatccggaggagcgtgctaagcaagatcccgtatat
cgcgagcgtttggatcttgagtgtaaaattattattgatatgggtttcccaggttacttt
ctcatcgttcaggattttattaactgggggaagtccaatggtgtacccgtgggtcccggt
cgcggttccggcgctggttcattagttgcttattctttaggtattaccgatctggatccg
attcgctatgacttactatttgagcgattcctaaatcccgagcgtgtttccatgcctgac
tttgacattgatttttgtcaggataagcgtgagaaagttattgagtacgtcaaggagaaa
tacggtcgtgcagcggtcagtcagattgctaccttcggcaccttaggtgcaaaggctgtc
gtgcgtgacgtcggtcgcgtgttagaaatgccgtactcattgtgcgacggtctatctaaa
ttgattcccttcaatccggcaaagccttggagtcttagtgatgccatggagggcgaacct
gagtttaagcgtcgttacgatgatgatgaagaggttcgatcgatcgtcgatagctcatta
ccgttagagggcttagtccgtaacgtaggtatgcacgccgggggcgttttaattgctccg
ggtaagttaaccgacttttgtcctttatattgtcaacccggacatagtggtagcgttgta
tctcagtatgataaggatgatgtcgaggcggcaggtctggttaagtttgacttcttaggc
ctacgtaacctgacaattcttgattgggccgtacgctatgtccagcgctttaatcaaggt
caggaagcctttgatattatggcggtgcccttagacgacaaggcgacgtatgatttattg
tccgagggtaatacaaccgccgtgttccagctagagtcccgaggcatgaaggagctctta
cgtaagctgctaccttcgacttttgaggacgtcattgcggttttagccttattccgtccg
ggtcctcttgactccggaatggtagatgatttcgtcaatcgtaagcacggacgagcagag
gttgactactttcatgaggatctgaccagcacccttgacagtacctacggggtgattgtt
taccaagagcaggtgatgttaatctcccaaattatcgggggatacagtttgggtggtgcg
gacctgttacgccgcgcgatgggtaagaaaaaacccgaagaaatggcggagcatcgcaag
ctctttgaagccggtgccatcaaaaagggttatgatggcgagatggctaagaacctcttc
gacttgatggagaagttcgccggttacggttttaacaaatcgcactcggctgcttatgcc
ttaatttcctatcaaaccgcttggcttaagaagtattatccggcagaatttatggccgct
accttatcctcggacatggatgatacggataagattcagatattctggcgtgactcttta
gacaatggtttgactgttttaccggtcgatattaatcattctcaatatcgctttgaaccg
gtgcctgataagcaccttgaagaaaaaggcagtattcgaactatccgttttggtatgggc
ggagtcaagggagtcggtgagagtgcgattgaaaatatcttagcagcacgcaatagcgat
ggtccttttgtggatttgtatgatttttgttcccgcattgatcgccataccgtcaacaaa
cgggcgatggaagcattaattagagccggtgcctttgatagcattgaaaccaatcgccgt
gccttattagaaagtctgcccatggccattgatgcggccgaacaaaatgatcgtaacgca
aatcaagtatcgctatttggcgatgactcaggtgatatcgtcgctcacgagattcagagc
attaagccttggacgctttatgacatgttgattgaagaaaaaaaggccttgggattttat
tttagtcatcatttgtttgacgtatggcgcgatgaggtcagacgttttgcaccggcgcca
ttagccaatctaaaagaatcacggagtacgcaatgggttgccggggtattgatcgctacc
agagcatttcaactaaaagataaagatgacagactgtatttcttattaattgatgatggc
agtgcgcaaattgaagtgacttgtgattcgcatttatatgaaagttgtcgtcatcttttc
aatgtggatgatttattgctggttgaagcacgagtttcacgcagtaagttcaacaacacc
cttcgtattaatgccaatgcattttataatttacagtctgctcgtgagtcggtggccaag
gatttaagcgtggtattaacagagccgattcctgccaagcaattgcatgtattgatgaat
ccataccgtgctgagcccgaaaatggttttcatggtgtggcggttaggtttttatatcat
cctacgacgcatatttcttgtgaaatacagttaggagaagagtggcgtgtgcggctaaac
ccacaatttttggagggattggctgcccgcgcagaaattgctagctttgaagtaaattat
tag
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