Oligella ureolytica: I6G29_02260
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Entry
I6G29_02260 CDS
T07321
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
oue
Oligella ureolytica
Pathway
oue03420
Nucleotide excision repair
oue03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6G29_02260
03430 Mismatch repair
I6G29_02260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oue03400
]
I6G29_02260
Enzymes [BR:
oue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6G29_02260
DNA repair and recombination proteins [BR:
oue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6G29_02260
MMR (mismatch excision repair)
Other MMR factors
I6G29_02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_22
ACC_central
Motif
Other DBs
NCBI-ProteinID:
QPT40455
LinkDB
All DBs
Position
complement(416871..419159)
Genome browser
AA seq
762 aa
AA seq
DB search
MLEQLNDEQRAAVTTDAQHILVLAGAGSGKTKVLTSRMAWLLQQGLSPASLMAVTFTNKA
AKEMLSRLAAITPLNTRSMWIGTFHGLCNRMLRMHYRDAGLPQQYQILDSGDQQSAIKRL
LKNHSIDTEKFPAREVQRFINSHKEKGERATDIQAWDPHSAKLIEVYQLYDEQCQREGVV
DFTELLLRCYELLSRNQLIREHYQRRFQHILIDEFQDTNDLQYRWLCLLGGGGASLFAVG
DDDQSIYAFRGANIDNMMSFERDYAKGSIVRLEQNYRSYGHILNSANALIKHNPNRLGKA
LWTERGEGEPVRIMELDSEQEEARWVTDEIRSLINDGMERQEIAILYRSNAQSRALEHAM
FNARIPYRVYGGTRFYERQEIKHVMAYLRLIASLDDDTSFLRVVNFPARGIGARTIETLS
DHAREIGCSLANAVGAVSGRGGNSLASFIALIHSMRKVAEDVTLPELIQHVIEHAGLQRH
YENEREGEDRLNNLEELVNAAQVFVFEENFEGKKALEKVKQVVADVEFAVEETSALAEFL
SHASLESGDNQADRGEEAIQLMTIHAAKGLEFNAVFLCGLEEGLFPHENSLLEEGGLEEE
RRLMYVAITRARERLYITMARSRMLYGQSRYAVRSSFLDEMPEEAQKWLSPKDVSYYSAP
RGPSSWSGGSMTGRSSGAGSGVGFPSGTVGAGRAGYANASLSSGVQVGDKLFKIGQTVSH
ARFGQGVVMQLQGQGTEATARIFFSEHGEKTLALGVAKLDIV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgctagagcaattaaacgatgagcaacgcgctgcggttaccaccgatgcacagcacatt
ttagtgttggcgggtgccggcagcggcaagaccaaggtgttaaccagtcgcatggcgtgg
ttactccagcagggcttaagtcctgcttctctgatggcggtgacctttactaacaaggca
gccaaagagatgctctcacgtttggctgcgattaccccgctcaacacgcgtagtatgtgg
atcgggaccttccatggtctctgcaaccggatgctgcgcatgcactatcgtgatgccggt
ttgccacagcaatatcagattttagatagcggtgaccagcaatctgccattaagcgttta
cttaaaaatcactccatcgatacggagaaattcccggcccgtgaagtacagcgttttatt
aactctcacaaagaaaagggcgaacgtgccactgatatacaggcttgggatccgcatagt
gcaaagctaatcgaggtttatcagctctatgatgagcagtgtcagcgagagggcgtggta
gatttcactgagctgctcttacgttgttatgaattgctcagtcgcaatcaattgattcgt
gagcattatcagcgacgctttcagcatatcttgattgatgagttccaagataccaacgat
ctgcaatatcgctggttatgtttattgggaggtggtggtgcctctttatttgctgtgggt
gatgatgatcagtctatctatgcatttagaggggccaatattgacaatatgatgtctttt
gagcgtgattatgccaaaggcagtattgttcgcctcgagcaaaattatcgatcctatggt
catatccttaatagtgccaatgctttaatcaaacataaccctaaccgtctgggtaaggca
ctctggaccgagcgaggcgagggtgagcccgtgcgcattatggagcttgatagtgagcaa
gaggaagcacgctgggtgactgacgagattcgttccttaatcaatgacgggatggagcgt
caggaaattgccattttatatcgtagtaatgcccaatcgcgtgccttagaacacgccatg
tttaacgcacggataccgtatcgcgtctatggtggtacgcggttctatgagcgtcaagag
attaagcatgtgatggcgtatttgcgtttaattgcgagcctggatgatgatacctccttt
ttacgtgtggttaacttccccgctcgtgggattggcgcccgtacgatagaaacactgagc
gatcatgcgcgtgaaattggttgtagtctggccaatgccgttggagcagtgagtggtcgg
gggggtaatagtctagctagttttattgccttgattcacagtatgcgtaaggtggcagag
gatgtgaccttacccgagctaattcagcatgtgattgagcatgccggcttacagcgtcat
tatgaaaatgagcgtgagggtgaggatcgtcttaataacttagaggagctggttaatgcc
gctcaagtctttgtctttgaagaaaacttcgaaggtaaaaaggccttggaaaaggttaaa
caggtcgttgctgatgtggagtttgccgttgaagagactagcgcgttagcggagtttcta
tcgcacgcctcgttggaatccggtgataatcaagccgatcgaggtgaagaagcgattcag
ctgatgaccattcatgcggccaaagggctcgagtttaatgccgtgttcttatgtggtctt
gaggagggattattccctcatgaaaatagtctgctagaagaaggtggtttagaggaagag
cgtcgtctgatgtacgtcgcgattaccagagcacgcgaacggctatatattacgatggca
cgtagtcgcatgctttatggtcaatcacgttatgccgtacgttcaagtttcttagatgag
atgcccgaggaagcacaaaaatggttatctccaaaggatgtgagctattattcagcccct
cgtggaccaagtagttggagtggcggttccatgaccggtcgttcgagtggtgcaggttcc
ggcgtgggctttcctagcggtacggtaggagcagggcgtgcaggctatgctaatgcgtcg
cttagttcaggcgtgcaagtaggtgataagctatttaaaataggccaaaccgtaagtcac
gctcgttttggccagggggtggtgatgcagttgcaggggcaaggcacagaagccactgca
cgcatctttttctctgagcatggagaaaagacgctggccttgggtgtggccaaactggat
atcgtttag
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