Oligella ureolytica: I6G29_02480
Help
Entry
I6G29_02480 CDS
T07321
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
oue
Oligella ureolytica
Pathway
oue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G29_02480 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oue03021
]
I6G29_02480 (rho)
03019 Messenger RNA biogenesis [BR:
oue03019
]
I6G29_02480 (rho)
Transcription machinery [BR:
oue03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
I6G29_02480 (rho)
Messenger RNA biogenesis [BR:
oue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I6G29_02480 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_25
NACHT
ResIII
AAA
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPT40493
UniProt:
A0A378XEA9
LinkDB
All DBs
Position
470521..471777
Genome browser
AA seq
418 aa
AA seq
DB search
MHLNELKSLHVSELLELAQQLEIDNANRFRKQELMFAIMKKRAKSGEQIFGDGVLEVLPD
GFGFLRSPETSYLANTDDIYISPSQIRRFNLHTGDSVEGEVRVPKDNERYFALVKVEKVN
GAAPDRVKHRMMFENLTPLHPDEPLHLERDIRSEENNTGRILDIFAPLGKGQRALIVAPP
KSGKTVMMQHIAQSITTNHPDATLIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVIILLDSITRLARAYNTVIPASGKVLTGGMDANALHRPKRF
FGAARNVEEGGSLTIVGTALIETGSRMDDVIYEEFKGTGNSEVHLERRLAERRLYPAINL
NKSSTRREELLMKPEDLQKVWILRKFIHDMDEIEAMEFILGKIKETKNNAEFYDMMKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaaacgaactcaaatctttacacgtctccgaattactggagctggcgcaacaa
ttagaaatcgataacgccaaccgcttccgtaagcaagagctgatgtttgccattatgaaa
aaacgcgccaagagcggcgagcaaattttcggcgatggtgtactggaagttttaccggat
ggtttcggctttttacgttctccggagacttcgtatttagccaacacagacgacatttat
atttccccttcacaaattcgtcgctttaacctccacacaggtgactcggtagaaggtgaa
gtacgtgtacctaaagacaatgagcgttattttgccttagttaaagttgaaaaggttaat
ggcgcagcgcccgatcgcgtcaagcatcgcatgatgtttgaaaacctaacgcctctacac
ccggatgagccactgcatttagagcgtgacattcgcagtgaagaaaataacaccggtcga
attttagatattttcgctcctctcggtaaaggtcagcgtgcactgattgtcgcgcccccc
aaatccggtaagaccgtcatgatgcagcacattgcgcaatctattacgaccaatcaccct
gacgctaccttaattgttttattagtcgatgagcgtcctgaggaagttaccgagatgcag
cgcaccgttcgtggtgaggttgttgcttcaacctttgacgaacccgctacccgtcacgta
caagtagcagaaatggtcattgaaaaagctaagcgtctggttgaaatgaaaaaagacgtg
attattctgcttgattcaatcacccgcttagcacgtgcgtacaacacggtaattcctgcc
tcaggcaaggtattaaccggcggtatggatgccaacgctctccaccgccctaagcgcttc
tttggtgcagcacgtaatgttgaagaaggtggttctttaaccattgtcggtacggcccta
attgaaacgggtagccgtatggacgatgtgatttacgaggaatttaaaggcaccggtaac
tccgaggttcacttagagcgtcgcttagctgaaagacgtctctaccctgcgattaacctc
aacaaatcaagcactcgtcgtgaagaactactgatgaagcccgaggatttacaaaaagtc
tggattttacgtaagtttatccatgatatggacgagattgaggcaatggagtttatcctc
ggcaaaatcaaagaaaccaagaacaatgccgaattctacgatatgatgaagaaataa
DBGET
integrated database retrieval system
