Oligella ureolytica: I6G29_07065
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Entry
I6G29_07065 CDS
T07321
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
oue
Oligella ureolytica
Pathway
oue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6G29_07065 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oue03021
]
I6G29_07065 (rpoC)
03400 DNA repair and recombination proteins [BR:
oue03400
]
I6G29_07065 (rpoC)
Enzymes [BR:
oue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6G29_07065 (rpoC)
Transcription machinery [BR:
oue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6G29_07065 (rpoC)
DNA repair and recombination proteins [BR:
oue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6G29_07065 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
HTH_13
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QPT38978
UniProt:
A0A378XG75
LinkDB
All DBs
Position
complement(1418642..1422925)
Genome browser
AA seq
1427 aa
AA seq
DB search
MNGLLSLYKQIAPDEQFDAIKIGIASPEKIRSWSFGEVRKAETINYRTIKPERDGLFCAK
IFGPTKDYECLCGKYKRLKHRGIICEKCGVEVTAAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAMCVIEPGMTPLQRGQIMTEEEYNNKVDEYGDEFVALM
GAEAIRELLRTLDIDKEAEVLREELKITTSEAKLKKISKRLKVVEGFQKSGIKPEWMILE
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIESYAPDIIVRNEKRMLQ
ESVDSLMDNGRRGKAMTGQNKRQLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKLMALELFKPFIYHRLVAMDLVATTKAAKRLVEAQEPVVWDVLEEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQVES
RTLMLASNNILFPASGEPSIVPSQDIVLGLYYATRSRINGKGEGSIFADLNELHRAYNSG
AVELQSRITVRLPEWVKDENGEFQKQLKRVETTVGRALLSEILPKGLPFSVLDKSLKKKE
ISNLVNQSYRRCGLRETVIFADKLMQSGFRLATKAGISIAVDDMLVPAAKSDILSQASEE
VKAIDKQHSSGLVTTQERYNNVVDIWGKATERVTKVMMEKLATEKVVDRHGEEVEQESFN
SIYMMADSGARGSATQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVIIENDCGTTNGYLVKAKVEGGEIIEPLGDRVL
GRVAAVDIVDPDTQETILPAGSMLNEDAVELINNFAIDEIKIRTPLTCETRHGLCAHCYG
RDLGRGSLVNRGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTASVSSVETKSNGKVAF
LTSMRYVTNSKGERIAISNNGELLILDPVTERERERHRIPYGATVLVGDADEVKAGAKLA
TWDPLTRPIVSEYAGQVKFDNIEEGVNVAQQTDEVTGLSTLVVITPKRATRANVRPQIKM
LDEKGEEITILGPNNTSHTVAISFPVGALIRVRDGQDIGVGEIVARIPVDSQKTRDITGG
LPRVVELFEARSPKDAGILADVSGVVSFGKETKGKQRLVITDTDGQPHEFLIPKEKHIQV
QNGRVVHQGELIVDGPSDPHDILRLKGIEKLAQYIIDEVQEVYRLQGVKINDKHIEVIVR
QMLRRVVIEDAGDTSFIPGEQVERSALLDENDRVEAEGGQPATYQNILLGITKASLSTDS
FISAASFQETTRVLTEAAVMGKRDELRGLKENVIVGRLIPAGTGLSYHIARRKKVEGRSA
IESAAAEQENPFVESEPVSLESVLSGSTAETAPADGGNEESSGVAEE
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtttattaagtttatacaaacaaattgctcccgatgagcagtttgatgcaatc
aaaattggtattgcttcacccgaaaagattcgttcatggtcttttggtgaggttcgcaag
gctgaaaccatcaactaccgcacgattaagcctgaacgtgatggtcttttctgcgccaag
atttttggtccgacaaaagactatgagtgcttgtgcggtaagtataagcgtttaaaacac
cgcggtattatttgtgaaaaatgtggtgttgaggttacagcagctaaggtacgccgtgag
cgtatgggccatatcgaattggccagtccggttgctcatatttggttcttaaaaagctta
ccgtctcgcttaggtatggttctcgatatgacgttacgtgatatcgagcgcgtactctat
tttgaagcgatgtgtgttattgagcctggcatgacgcctttgcagcgcggccagatcatg
acagaagaagagtacaacaacaaagttgatgaatacggcgatgagttcgttgccctcatg
ggtgccgaggcgattcgcgagttattacgtactctggacatcgacaaggaagctgaagta
cttcgcgaagaattaaaaatcacgacctcagaagcgaaattgaaaaagatttctaagcgt
ctgaaagttgttgagggtttccaaaaatccggtattaagcctgaatggatgattcttgag
gtattacctgtattaccacctgatttacgtccattagtaccgctagatggtggtcgtttt
gcaacgtctgacctcaacgatttataccgtcgagtgattaaccgaaataatcgtttgaag
cgtttaatcgaatcgtatgcgcccgacattatcgtgcgtaacgagaaacgcatgcttcaa
gagtctgttgactcattgatggataatggccgtcgtggtaaagccatgaccggtcagaat
aaacgtcaacttaaatcacttgccgatatgattaagggtaaggggggtcgcttccgtcaa
aacttattaggtaagcgcgttgactactccggtcgttcggttattgtagttggtcctcag
cttaaactgcaccagtgtggtttacctaaattaatggcgctagagctatttaagccgttt
atttaccatcgtttagtggcaatggatctcgtggctacaactaaagcggctaaacgcttg
gttgaagcacaagaacctgttgtttgggacgtactggaagaagttattcgtgagcacccg
gtgttacttaaccgtgcgccaaccttacaccgcctaggtattcaagcctttgagccggta
cttattgaaggtaaagcgattcaattacacccgctagtgtgtgcggcctttaacgcggac
tttgacggtgaccaaatggctgttcacgttccgctatcgattgaggcgcaggtagaatct
cgcacattaatgcttgcttctaacaacattttattcccggcgagtggtgaaccgtcgatc
gttccttctcaggatattgttttaggtctttactatgcgactcgttcgcgcattaatggt
aagggcgagggcagtatttttgcggatttaaatgagctacatcgtgcctataacagtggc
gctgttgagttacaaagccgcatcacagtacgccttcctgaatgggttaaagacgaaaac
ggtgagttccagaagcaacttaaacgcgttgaaacgacagttggtcgtgcgctgttgtct
gaaattttacctaagggcttaccatttagcgtattagataaatcactcaagaagaaagaa
atttctaacttggtgaatcagtcctatcgtcgctgcggtctacgtgaaacagttattttt
gcagataaattgatgcaatcaggtttcagattagcaacgaaagcgggtatttctatcgca
gtcgatgatatgttagtcccagctgctaagtctgatatcttgtctcaagcgtctgaagaa
gttaaggcgattgataaacagcactcttcaggtttagtaactacccaagaacgttataac
aacgtggttgatatttggggtaaagcgactgagcgtgtgactaaagtcatgatggagaaa
ttagcaactgagaaagttgttgaccgtcatggtgaagaggttgaacaggaatcgtttaac
tcgatttatatgatggctgactcgggtgctcgtggttctgcgacacagattcgtcagtta
gctggtatgcgtggtctaatggctaaaccggatggttcaattattgaaactccgattacg
gcaaacttccgtgagggtttaaatgtacttcagtactttatttcaacccacggtgctcgt
aagggtctagcggatacggcgctgaaaacagcgaactcgggttatttaactcgtcgttta
gttgacgtgacgcaagacttagtcattattgaaaatgattgcggtaccaccaatggttac
ttagttaaagcgaaggtagagggtggtgagattattgaaccactaggtgatcgcgtctta
ggtcgtgtggcagcggttgatattgttgaccctgacacccaagaaaccattcttccggcc
ggttcgatgcttaatgaggatgcggttgagttaataaataacttcgctattgacgagatt
aagatccgtacgccattgacatgtgaaacccgtcacggtttatgtgcacattgttatggt
cgtgacttaggccgtggttctctagtgaaccgtggggaagcggtcggtgttatcgctgct
cagtctatcggtgagccgggaacacagttaacgatgcgtacgttccacattggtggtgcg
gcatctcgtacggccagtgtatcaagtgttgagacgaagtctaacggtaaggtagccttc
ttgacctcaatgcgctatgtgactaatagcaaaggcgaacgcattgcgatttcgaataac
ggtgagttactaattcttgatccggtcactgagcgcgagcgtgaacgtcatcgtatccct
tacggtgcaaccgtattggttggcgatgccgacgaagttaaagcaggtgctaagttagcg
acgtgggatccactaactcgtcctattgtttctgagtatgccggtcaggttaaattcgat
aatatcgaagaaggcgtgaacgttgctcagcagacggatgaggtaaccggtttatcaaca
ttggtagtgatcacaccgaagcgcgcgacacgtgccaatgtccgtccgcaaattaagatg
cttgacgaaaaaggcgaagagatcacgattctcggtcctaataacaccagtcacacggtg
gcgatcagcttcccggttggggcgttgattcgcgttcgtgatggtcaggatatcggtgtg
ggtgagattgttgcccgtattccggttgactctcagaagactcgtgatattaccgggggt
ctacctcgagtggttgagctatttgaagcacgctctccgaaagatgccggtattttggct
gatgtgtccggtgtcgtttcttttggtaaagaaaccaagggtaaacagcgtttagtgatt
accgatactgacggtcaaccgcatgagttcctaattcctaaagaaaagcatattcaggta
caaaacggtcgtgtcgtacaccaaggtgagctgattgttgatggtccttcagatcctcac
gatattcttcgcctcaaaggtattgagaaattagctcagtacattattgatgaggtacaa
gaggtttatcgcttacaaggtgtgaagattaacgataagcacattgaagtgatcgttcgt
cagatgttacgtcgtgtcgtgattgaagacgccggtgataccagctttatcccgggcgaa
caggttgaacgttcagctttacttgatgaaaatgatcgtgttgaagctgaaggtggccag
ccggcaacctatcaaaatatcctcttgggtattacgaaggcttctctatcaacggattca
ttcatttctgcggcatcgttccaagaaacgactcgcgtactgactgaagcggctgttatg
ggtaaacgtgacgaactacgtggtctaaaagaaaacgtaatcgttggtcgcttaatccct
gccggtaccggtttgtcgtaccacattgctcgccgtaagaaggtcgaaggtcgtagcgcc
attgaaagcgctgccgctgagcaggaaaatccattcgttgaatcagagccggtctctctt
gagagtgtgttaagcggttctaccgctgaaacagcacctgctgatggtggcaacgaggaa
tcatctggtgtagcagaagagtaa
DBGET
integrated database retrieval system
