Oligella ureolytica: I6G29_12410
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Entry
I6G29_12410 CDS
T07321
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
oue
Oligella ureolytica
Pathway
oue03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6G29_12410 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oue03400
]
I6G29_12410 (uvrB)
DNA repair and recombination proteins [BR:
oue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6G29_12410 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6G29_12410 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QPT39896
UniProt:
A0A378XK16
LinkDB
All DBs
Position
2550999..2553026
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AA seq
675 aa
AA seq
DB search
MNQAKFIEFPNSPFQLYQPFPPAGDQPAAIDALVEGINDGLMFQTLLGVTGSGKTYTMAN
TIARTGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPARDLFIEK
DSSVNEHIEQMRLSATKSLLERRDTIVVGTVSTIYGIGNQSDYHAMILLLRTGDEIPRNE
LLARLVAMQYERNDMEFSRGTFRVRGDVIDVFPSENAELAVRLSMFDDEIETIELFDPLT
GKVRQAIPRFTIYPSSHFVTPRETILRAMETIKEELRERKQYYYDQGMLVEAQRIEQRTL
FDLEMMQELGFCKGIENYSRHLSGAAPGEPPATLIDYLPQDALMFFDESHVMMGQLRGMY
RGDRSRKETLVQFGFRLPSALDNRPLKIDEFEQRMRQSIFVSATPADYESERSDQVVEQV
VRPTGLVDPTIEVRSALTQVDDLLGEAKERIALGERVLVTTLTKRMAEDLTEYLEENGLK
VRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNLNGKAILYADRITDSMARAMDETERRRIKQMSFNEAHGITPVGVIKE
VKEMIDGVMAPVEDTNIGFKTEDLKRFVNDEKALSRELKRLEKAMMDHAKNLEFEQAAAA
RDQLQRLKQEVLLNS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagcaaaattcatagaatttcccaatagcccttttcagttgtatcaacccttt
cctccggctggcgaccagccagcagcgattgacgctttggtagaggggattaatgacggt
ctgatgtttcaaacattactgggcgtaaccggttccggcaaaacatacaccatggccaat
accattgccaggacgggtaggccggcactcgtgttagcaccaaataaaacactggcggcc
cagctttatgctgaaatgcgggagtttttcccgcgtaatgcagttgagtattttgtttca
tactatgactattaccagccggaggcttatgtgccggcacgtgatttgtttattgaaaaa
gactcgtctgttaatgagcatatcgaacagatgcgcttatctgcgaccaagagcttgtta
gaaaggcgtgacaccattgtggttggtaccgtatcgaccatttatggtattggtaaccag
agtgactaccatgccatgattttattgctcaggacaggtgatgagattcctcgtaacgaa
ttactggcgcgcttagtagctatgcaatatgagcgtaatgatatggaatttagtcgcggt
acgtttagggtgcgtggtgacgttattgatgtgttcccttctgaaaacgcggagcttgcc
gttcgtttaagcatgtttgatgatgagattgaaacgattgagctatttgatccattgacc
ggtaaagtaaggcaagcgatccctcgttttacaatttacccgagttctcactttgtgacg
ccccgagaaactattttgcgagcaatggagacgattaaagaagagcttcgtgagcgtaag
cagtattattacgaccaaggcatgctggtggaggcgcagcgtattgagcaacgcacgctg
tttgatcttgaaatgatgcaggagttgggcttttgtaaaggcattgagaattactcaagg
catttatcgggggctgcgccgggggagccaccggctaccttgattgattatttaccccaa
gatgcattgatgttttttgatgagagtcatgtcatgatggggcaattgcgcggtatgtat
cgaggtgaccgttcgcgcaaagaaaccttagtgcagtttggttttagattgccctcggcg
ctcgataataggcctctcaaaatcgacgagtttgagcagcgaatgcgtcaaagcatcttt
gtttctgctacgccggctgattatgaaagcgagcgttctgatcaagtagtggagcaggtg
gtgcgaccgaccggtttggttgacccaactattgaggttcgatctgcattgactcaagtt
gatgatcttttgggtgaggccaaagagcgtattgcgcttggtgagcgtgtgctggttacc
acgttgactaagcgtatggcggaggatctcactgagtacttggaagaaaatggactcaag
gtgcgatatttacattcggatattgatacggttgaacgggtagaaattattcgcgatttg
aggctgggaacttttgatgtgctggtaggaatcaacctcttgagagagggtttagatatt
cctgaagtgtctttagttgcgattctagatgcagacaaagaaggtttcctccgttctgag
cgtagtttgattcaaaccattggtcgtgctgcacgtaacctcaatggtaaagcgatccta
tatgccgatcgtattaccgattcaatggcgcgtgccatggatgaaaccgagcgtcgtcgt
atcaagcaaatgagttttaatgaagcgcatggtattacgccggtgggtgtaatcaaagaa
gtaaaagaaatgatcgatggtgtcatggctccggtagaagacaccaacatcggctttaag
acagaggatctaaagcgttttgttaatgatgaaaaagcgcttagccgtgagttgaaacgc
ttagaaaaggcgatgatggaccatgctaaaaatcttgagttcgagcaagcggctgcggct
cgtgatcagttgcaaaggctaaagcaagaagttttgttaaactcctaa
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