Oligella ureolytica: I6G29_13590
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Entry
I6G29_13590 CDS
T07321
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
oue
Oligella ureolytica
Pathway
oue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G29_13590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oue03019
]
I6G29_13590
03400 DNA repair and recombination proteins [BR:
oue03400
]
I6G29_13590
Enzymes [BR:
oue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6G29_13590
Messenger RNA biogenesis [BR:
oue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G29_13590
DNA repair and recombination proteins [BR:
oue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6G29_13590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Pro-kuma_activ
FecR_C
zf_C2H2_ZHX
Motif
Other DBs
NCBI-ProteinID:
QPT40108
LinkDB
All DBs
Position
2795470..2797578
Genome browser
AA seq
702 aa
AA seq
DB search
MKDNALTLLREMTANHAAEFHEGQFEAILQLVEEQSKLLVVQKTGWGKSAVYFIATKLLR
LQGKGPTIIISPLIALMRNQVERAGELGLSVVSINSAQSEQENDEAKQLILSREIDALII
SPEKLANDELVENVLNHILSNIGLFVVDEAHCISDWGHDFRPDYRRIVRLLNRMPANIPI
LATTATATTRVITDINRQLGDDLQVIRGDLKRQSLYLQNMPSAGRAARMAWLAEYIPQLE
GTGIVYVKTIRDGELLAEWLRYKGIHASFYNGNSYNELRIRLEDALLSNKLKVLVATSAL
GMGFDKPDLGFVIHFQLPGSIVEYYQQVGRAGRAIEHAYGILMDGPESEKIQDYFINNAF
PSEEEIEQVLTALEQSDGVKDYEIERLINLSVSRIRAVLKFLTVENPSPIYKDSRTKKYF
RNEQNYSLPTEHIEHITAIRKREWNQLRAYHNATNCLMKELTFALDDPLTEDCGTCMNCT
PNRQLLTEVSEDVVKEALEFSKYRYIKISPRKKFAISGAMAKNAFPHYGFPIKDLALQAA
EGLALSSWRDGAWGDLVAHDKGVGHFSDDLLEPMVTMVKSMEFDEKPQWLTYIPSLRNPE
LVKSFAYRLAEKLGIPCREALVMVEQRPPQKTMQNSFRQSSNLDGVFTIDGKQGFRSPVL
LLDDAVDSGWTFTVAAALLRRAGAVAVYPIALTSTSKQNQGE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataatgccttgaccttattacgagaaatgactgctaatcatgctgctgagttt
cacgaagggcagtttgaagcaattctgcaattggtcgaagagcaatcaaagctattggtt
gttcaaaaaactggctgggggaaaagtgcggtctattttattgcaaccaaattattgcgt
ctgcaaggtaaaggtcctacgattattatttcaccgcttattgctttaatgcgtaaccag
gtagagcgtgcgggtgagctaggtttaagtgtagtctccattaactctgcacaatcagaa
caagaaaatgatgaagccaaacaactaattttgagtcgggaaattgatgcccttattatt
tcaccagagaaactagcaaatgatgagctagtagaaaatgtactgaaccatattctttct
aatattggtttatttgtagtcgatgaggcgcattgtatttctgattgggggcatgatttt
cgaccggattatcgccggattgttcgcttattaaatcgtatgcctgctaatattcctatt
ttggcgacaacagctactgccactactcgggtaattactgatatcaatcggcaattaggt
gatgatttgcaggttatccgaggtgatctgaaacgacagtctctttatttacaaaatatg
ccgtcagctggacgagctgcacgaatggcatggcttgctgagtatattcctcagcttgag
ggaaccggtattgtttatgtaaaaaccattagggatggtgagcttttagcggagtggctc
agatataaaggcatacatgccagtttttataatggcaattcctataatgagcttcgcatt
agacttgaagatgctttgttgtctaataaattaaaagtattagtagcaacttctgcctta
ggtatgggatttgataaaccggatttaggttttgtcattcacttccaattaccaggcagt
attgtggagtattatcaacaagtgggtcgtgccggacgtgctattgaacatgcctatggt
attttgatggatggtcctgagtctgagaagatacaggattattttattaataacgccttt
cctagtgaagaagaaatagagcaagtcttaactgcattggaacagtctgatggcgtaaaa
gactatgagatagaaagactaatcaacttgagtgtgagcagaattcgagctgttctaaag
tttttgacagtagagaatccttctccaatttataaagacagtagaactaagaaatatttc
aggaatgaacaaaactatagtttacctacagagcatattgaacatattacagccattaga
aaaagggaatggaatcaattaagggcttatcataacgccactaattgtttgatgaaagag
cttacttttgctttagacgatcctttgactgaggattgtggaacctgcatgaattgtacc
cctaatcgtcagttattgactgaagtcagtgaggatgtggttaaagaagcactggagttt
tcaaagtatcgttacattaaaatcagcccaagaaaaaaatttgccatatctggggctatg
gctaaaaatgcattccctcattatggatttcctattaaagatttagctttgcaggctgct
gaaggtttggcattatctagttggcgagatggtgcttggggagatttggttgctcatgac
aaaggggtaggacattttagtgatgatttgttagagcctatggttactatggttaaatca
atggagtttgatgaaaaaccgcaatggctaacctatataccctcactgcgtaatcctgaa
ctggttaaaagttttgcctatcgtttggctgaaaaattaggaattccctgcagagaggca
ttagtcatggtggagcagcggcctccccagaaaacgatgcaaaatagttttagacagagc
agtaaccttgatggagtttttaccatagatggtaagcaaggattcagaagtccagtgtta
cttttagatgatgccgtcgattctggttggaccttcacagtagcagctgccttgttacga
agagcaggtgctgttgctgtttatcccattgcattaactagtacatccaaacagaatcaa
ggtgaataa
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