Oligella urethralis: CEQ07_00275
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Entry
CEQ07_00275 CDS
T05343
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
our
Oligella urethralis
Pathway
our00300
Lysine biosynthesis
our00470
D-Amino acid metabolism
our01100
Metabolic pathways
our01110
Biosynthesis of secondary metabolites
our01120
Microbial metabolism in diverse environments
our01230
Biosynthesis of amino acids
Module
our_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
our00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CEQ07_00275 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CEQ07_00275 (lysA)
Enzymes [BR:
our01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CEQ07_00275 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Myc-LZ
Motif
Other DBs
NCBI-ProteinID:
AVL70011
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All DBs
Position
complement(55733..57037)
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AA seq
434 aa
AA seq
DB search
MQHHLAHSTTRTPVGAPHFHYQDHALYVEQLAIKALAEQYGTPLYIYSKAALKAAWARYQ
EAIDGRDVLICYAMKANSNLAILNLFAQWGAGFDIVSGGELARAIKAGADPQKIIFSGVG
KQAWEIKAALNAGIKCFNVESIPELALIQEVAATMDKKAPVSLRINPDVDAKTHPYISTG
LKDNKFGIAMEDALATYEHAMCLSHVNIVGLDCHIGSQITELAPYQDALARLLSLMDQLK
SKGIQLKHLDIGGGLGIPYLNEEVPHPRDLINTTLATLQARGYADVQLVLEPGRSLVGNS
GMLVTEVLFLKQGESKNFAVVDAAMNDLLRPTFYDVYHGALAVELKAGETQRYDVVGPVC
ESGDWLAKDRDFVIAPGTFIAIESAGAYGFVMSSQYNSRPRAAEVLVDGDKSYVIRRRET
IEELFEHEHIPNAI
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcacttagctcattccaccactcgcacaccagttggtgccccccatttccac
taccaagatcatgccttatatgttgaacagcttgctattaaagcactggctgagcagtat
ggtacgcccttgtacatctactctaaagcagcattaaaggcggcgtgggcgcgctatcag
gaagcaattgatgggcgtgatgtgttaatttgctatgccatgaaggcgaactcaaactta
gccattttaaatttatttgcccaatggggtgctggctttgatattgtctccggcggcgaa
ttggcacgtgctatcaaggccggcgccgatccgcagaaaatcattttttctggtgtgggc
aagcaggcttgggagattaaagccgcattaaacgctggcattaagtgctttaacgtagag
tccatcccggagcttgcgctaattcaagaagttgccgcaaccatggataaaaaagccccg
gtttccttacggattaatcctgatgtggatgcaaaaacgcatccctatatttctaccggt
ctcaaagataataaattcggtattgccatggaggatgcgctcgctacctatgagcatgcc
atgtgtttatcgcatgtgaacattgtcggcttggactgccatatcggctcacaaatcacc
gaattagcaccctatcaagatgcattagcgcgtttattaagcttaatggatcaattgaag
agcaagggcattcaattaaagcatttggatattggtggcggcttaggtataccgtatctg
aacgaggaggtaccacatccacgtgacttaattaacaccaccctagcaacactgcaagcc
cgtggttatgctgacgtacagttagtgctggagccgggtcgctctttagtaggtaatagc
ggcatgctagtgacggaagtactgtttttaaagcagggtgagagcaaaaactttgctgtc
gtggatgccgccatgaacgacttactccgccccacattctacgatgtttatcatggcgcc
ttagcggtagagcttaaggcaggtgaaacgcaacgttatgatgtggtcggccccgtttgt
gaatcgggtgactggttagccaaggatcgagattttgtcattgccccagggacattcatt
gccattgagtcggccggcgcctatggctttgtgatgagcagtcagtacaatagccgtccg
cgcgctgctgaggtactggtcgatggtgataaaagctatgtgattcgacgccgtgagacc
attgaggagctatttgagcacgagcatattcccaacgctatctaa
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