Oligella urethralis: CEQ07_01675
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Entry
CEQ07_01675 CDS
T05343
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
our
Oligella urethralis
Pathway
our03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
our00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CEQ07_01675 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
our03400
]
CEQ07_01675 (xth)
Enzymes [BR:
our01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CEQ07_01675 (xth)
DNA repair and recombination proteins [BR:
our03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CEQ07_01675 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Phage_term_smal
Motif
Other DBs
NCBI-ProteinID:
AVL70264
LinkDB
All DBs
Position
complement(350224..351024)
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AA seq
266 aa
AA seq
DB search
MLKITTLNVNGIRAAARKGFFEWMQTQDADILCLQETRISEADLKDEIRHQRGYQSVYNH
AQKKGYSGVALYYKGNPDIEHGMDCEEFDPEGRLISATWDDLTVISAYLPSGSSSEERQA
AKFRFLDKFGPWIDRMMEHHRQTGHEYIICGDWNMAHKEIDLKNWRGNLKNSGFTPEERA
WMSHLFEERGFVDVFRQLNQEAEQYTWWSNRGRAWDNNVGWRIDYHISTPGIASKAIRTE
IYKEQRFSDHAPLTVVYDIDKEPYLR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaatcaccacgcttaatgttaacggtatccgtgcggcggcccgaaaaggcttt
tttgaatggatgcagactcaagatgctgatatcctctgtcttcaggaaacccgtatcagc
gaggccgatcttaaggacgagatacgccatcaaaggggttatcaaagtgtttataaccat
gctcagaaaaagggctacagtggcgtggcgctctattacaagggtaatcctgacatcgaa
catggcatggactgtgaggaatttgacccagagggacgtctaatcagcgccacctgggac
gatctcaccgttatcagtgcctacctaccgtccggctccagtagcgaagaacgtcaagcg
gccaaatttcgctttttagacaagttcggtccatggattgatcgcatgatggaacaccat
cgccaaacgggtcatgagtatattatttgtggtgactggaatatggcgcataaagaaatt
gatctaaaaaactggcgtggcaatttaaaaaactccggttttaccccagaagagcgcgcc
tggatgagtcatctctttgaggaacgcggttttgtcgatgtgtttcgtcaattaaatcaa
gaggctgagcaatacacttggtggagtaatcgcggacgggcgtgggacaataatgtcggc
tggcgtatcgactatcatatcagcacccccggcattgcctccaaagccatccgtaccgag
atttacaaggaacaacgcttttctgaccatgcgcctttaaccgtggtgtatgacattgat
aaggaaccatacctaagataa
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