Oligella urethralis: CEQ07_02415
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Entry
CEQ07_02415 CDS
T05343
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
our
Oligella urethralis
Brite
KEGG Orthology (KO) [BR:
our00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
our03400
]
CEQ07_02415
DNA repair and recombination proteins [BR:
our03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEQ07_02415
Archaeal homologous recombinant proteins
CEQ07_02415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
AcnX
DNA_pol_E_B
Trns_repr_metal
Motif
Other DBs
NCBI-ProteinID:
AVL70392
LinkDB
All DBs
Position
complement(521982..523202)
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AA seq
406 aa
AA seq
DB search
MRILHTSDWHLGRSLLGKRRSAEFSQLLNWMLQCIEQQQIEVLIIAGDIFDTTTPSVTAQ
DQYYNFLAAAAAKSCCRHIVVIGGNHDSASFLNAPGAILKNLNVHVVGQACENIRDEVLL
LDNHQGEVGLVLAAVPFLSDRDIRRYESLASLSDKDQQVVAAYHQHYEEVARHSKKLADK
HQVPMVATGHLFMTGGLTSEGDGVRDLYVGTLGQLKSDLFSPDFNYVALGHIHQPQKVGG
LNHIRYSGSPLPMCFDECERSKQVLVVDFNQEHQAEVTAVEVPTFQRLHRIRGDLKSLQS
AIEELKRQNESIWLEVSYQSDELQSNLRAVLTEQIKDSQIEILKFNNQQRQVVHLQATDT
LESLEELSVDDVFKRLLDRQNIPDSQRPELLMTYQETLHRLHHDQE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattttacatacatcagattggcatctaggtcgctcattgctaggcaaaagacgc
tctgcagagttttcacaactacttaactggatgctgcaatgcattgaacaacagcagatc
gaggtcctgatcatcgctggtgatattttcgataccaccacgcccagtgttactgcgcag
gatcaatattacaacttcttagctgccgctgccgctaaaagctgttgccgccatattgtg
gtgattggtggcaatcatgattcagcgagttttttaaatgcgcccggcgccattcttaag
aatctcaatgtgcatgtcgtcggtcaggcctgtgagaatattcgagatgaggtgctgttg
ctcgataatcatcaaggtgaggtgggcttagtattggctgcggtaccctttttaagtgat
agggacatacgtcgttatgaatccctagccagcctaagcgataaggatcagcaagtggtg
gcagcttatcatcaacattatgaggaggtcgcccgccactccaaaaagctagcagataag
catcaggtgcccatggtagccaccggtcatttatttatgacgggcggtcttacatccgag
ggagatggggtacgtgatttatatgtgggtaccttaggtcagttaaaaagcgatttattt
agccctgattttaattatgtggccttaggacatatccatcagccccaaaaggtgggcggt
ctaaatcatatacgctatagcggcagccccttgcccatgtgttttgatgaatgtgagcgc
agcaagcaggtcttggtggtggattttaatcaagaacaccaagccgaggttactgcagtg
gaggtccccacctttcagcgcctacacagaattcgcggtgatttaaaaagcttacagtcg
gcaattgaggaattaaaacggcaaaatgagtccatttggttggaagtaagctaccaaagc
gatgagttacagagtaatttacgagccgtactgacagagcaaatcaaagactcccaaatt
gaaattttaaagtttaacaatcagcaacgacaagtggtccatttacaggcaacggatacc
ttagagagcttggaggaattaagcgtagacgacgtctttaagcgcttattggatcgacaa
aacatccccgacagtcagcgcccagagttattaatgacttatcaagagaccctacaccgc
ttacaccacgatcaagagtag
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