Oligella urethralis: CEQ07_04050
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Entry
CEQ07_04050 CDS
T05343
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
our
Oligella urethralis
Pathway
our03420
Nucleotide excision repair
our03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
our00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CEQ07_04050
03430 Mismatch repair
CEQ07_04050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
our03400
]
CEQ07_04050
Enzymes [BR:
our01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEQ07_04050
DNA repair and recombination proteins [BR:
our03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CEQ07_04050
MMR (mismatch excision repair)
Other MMR factors
CEQ07_04050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
PcrA_UvrD_tudor
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVL70670
LinkDB
All DBs
Position
861155..863443
Genome browser
AA seq
762 aa
AA seq
DB search
MLEQLNPEQRSAVTTDQQHVLVLAGAGSGKTKVLTSRMAWLIQQGLSPASLLAVTFTNKA
AKEMLSRLASITPLNTRSMWIGTFHGLCNRMLRAHYRDAGLAQQFHILDSSDQQSAIKRL
LKTHSIDVEKFPVRDVQRFINAHKEKGERASDLQAWDPHSAKLIELFQLYDEQCQREGVV
DFTELLLRCYELLSRNQLIREHYQRRFQHILIDEFQDTNDLQYRWLCLLAGGGASLFAVG
DDDQSIYAFRGANVDNMMAFERDYARGSIIRLEQNYRSYGHILNSANALIKHNPKRLGKA
LWTERGEGEPVRIMELDNEQEEARWVVDEIRSLCREGTARQEIAILYRSNAQSRALEHAL
FSAAIPYRVYGGTRFYERQEIKHVMAYLRLIQSLDDDSAFLRVVNFPARGIGARTLETLG
DHARAIGCSLAMAVGAVSGRGGTALSAFIELIQAMRRVAETVSLAELIQHVIEHAGLKTY
YENEREGQERLDNLEELVNAAQVFSYEENFEGKKAVELVKQVATDVEFAVEESSALAEFL
SHASLESGDNQAERGEDAVQLMTIHAAKGLEFQVVFLTGLEEGLFPHENSLLEEGGLEEE
RRLMYVAITRARERLYITMARSRMLYGQSRYALRSSFLDEMPEAAQKWLSPKDVSYYAAA
RGQSAWSGSSFGGRANTGGAAFPGGTIGAGRATQAQAPMSSGVRVGEQLFKIGLSVRHSR
FGEGVIMQLQGQGSDATARIYFSEHGEKNLALGIAKLEIVKA
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagcaattaaaccctgagcaacgtagtgcagtgaccaccgatcaacagcatgtg
ctggtgttagcgggggccggcagtggcaagactaaggtcttaaccagtcgtatggcgtgg
ttaattcagcagggcttaagtcctgcttctttattagcagtgacttttacgaataaggct
gctaaagagatgctgtcacgcttggcctcgattacccctctcaatacccgcagtatgtgg
attggtaccttccacgggctatgtaatcgaatgttgcgcgcgcattatcgtgatgctggc
ttagcgcagcagtttcatattcttgatagctcggatcagcaatcggcgattaagcgtctt
ttaaaaacgcattcaattgatgttgaaaagtttcctgtgcgtgatgtgcaacgctttatt
aatgctcataaggaaaagggcgagcgtgcgagtgatttgcaggcttgggatccacacagc
gctaagttaattgagttatttcagctttatgatgagcaatgtcagcgcgagggggtggtg
gactttaccgagctgttgctacgctgctatgagttgctaagccgtaatcaattgatccga
gagcattatcagcggcgctttcagcatattttgattgatgaattccaagatacgaacgat
ttgcaatatcgttggttatgtctgttagcgggtggtggcgccagcttatttgctgtgggt
gatgatgatcagtcgatttacgcctttagaggggcaaatgtcgataatatgatggcgttt
gaacgtgactatgcgcgcggcagtatcatccgcttggagcagaattatcgctcttacggt
catatcttaaatagtgctaatgcacttattaagcataatcctaagcgcttaggtaaggcc
ttatggacggagcgtggtgagggcgaaccggtgcgtattatggagcttgataatgagcag
gaggaagcacgctgggtggtggatgagattcgttcactgtgtcgcgagggtacagcacgt
caggaaatcgcaattctgtatcgtagtaatgcgcaatcgcgcgcccttgaacatgcctta
tttagcgctgcgataccgtatcgagtgtatggtggtacccgtttctatgagcgtcaggag
attaagcatgtgatggcttatttacgcttaatccagagtttggacgatgattcggctttt
ttgcgcgtagtcaattttccggcccgtggtattggtgcacgcaccttggagaccttgggt
gatcatgcgcgcgccatcggttgtagtttagcgatggccgtgggggccgtcagcggtcgt
ggtggcacggccttaagcgcctttattgagctgattcaggcgatgcgtcgtgttgctgaa
acagtgagtttagctgaattaatccaacatgtgatagaacatgccggactgaagacctat
tatgaaaatgagcgcgagggacaggagcgtttagataacttagaggaacttgttaacgct
gctcaggtatttagctatgaagaaaacttcgagggcaaaaaggccgtagagttagttaag
caggtggcgactgatgtggagtttgcggttgaggaaagtagtgccttagcagagttttta
tcgcatgcttcattagagtctggtgataatcaggccgagcggggtgaggatgcggttcag
ctgatgacgattcatgcggccaagggtttggagtttcaggtggtcttcttaaccggcttg
gaggaggggttatttcctcatgaaaatagtctgctcgaagagggcggtctggaggaggag
cgccgcttaatgtatgtggccatcacgcgggcacgggagcggctgtatatcacgatggca
cgtagtcgtatgttatatgggcagtcacgatatgccttgcgttccagttttctggatgaa
atgcctgaagcagcgcagaagtggctctcgcctaaggacgtgagctattatgctgcagca
cgagggcagagtgcgtggagcggttcttcttttggtggtcgtgcgaacacgggcggagct
gcttttccaggtgggacgattggggcaggccgcgccacacaagcacaagcgccgatgagc
tcaggtgtacgcgtcggtgagcagttgtttaaaataggtttaagcgtgcgtcattcacga
tttggcgagggtgtgattatgcagttgcaaggacaaggttcggatgccactgctagaatt
tatttctccgaacacggggaaaagaatttagccctcggtattgcgaagcttgaaatagtg
aaggcttaa
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integrated database retrieval system
