Oligella urethralis: CEQ07_06750
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Entry
CEQ07_06750 CDS
T05343
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
our
Oligella urethralis
Brite
KEGG Orthology (KO) [BR:
our00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
our03009
]
CEQ07_06750
Enzymes [BR:
our01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CEQ07_06750
Ribosome biogenesis [BR:
our03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CEQ07_06750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_32
Methyltransf_ANTKMT
RrnaAD
Methyltransf_23
MTS
PabTrmU54_TRAM_dom
Methyltransf_11
PCMT
Methyltr_RsmB-F
Cons_hypoth95
DUF6402
CMAS
Motif
Other DBs
NCBI-ProteinID:
AVL71143
LinkDB
All DBs
Position
complement(1421087..1422466)
Genome browser
AA seq
459 aa
AA seq
DB search
MSEFFTIESLDLEARGIARREGKTIFVEGALPGETVRAKVVRRKPSYEIAVTEEVLHASS
LRVEPKCPNFGVCGGCLMQHVEPHAQVAIKQRALEDCFKHIAKLDIPQILPALYGPFWHY
RYRARLSVRYVAKKGGILTGFRERKSSYVADMTECLVLPQRLSDMLPALRQLIASFSIKE
RIPQMEVAVGDEVLVLVLRHLEPFEAADIAKLHAFAAEHDVSWWLQPKGPDTVHPLLAED
EQKLAYRLDQFGLRMAYRPTDFTQVNHFINRSMIAKALNLLAVEAGDRVADLFCGLGNFS
LPLATQAKEVVGIEGSEALTERALAAAAQHGLADKMSFSTLNLFEVDVEWLRALGYFDRM
LIDPPRDGALAVARALAALKAHERPKRIVYVSCNPATLARDAAILVRVGGYRLISAGVIN
MFPHTGHVESIAVFEYHPGDPIPAPEAEEGEGQVEALLA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattctttacgattgaatcccttgatcttgaggctcgcggcattgcccgacga
gagggtaaaacgatttttgtcgagggggctttgccaggcgaaaccgttcgtgccaaggtc
gtcagaagaaaaccctcctatgaaatagcggtgactgaagaggtattacatgcctcaagt
ttacgggtagagcctaagtgccccaatttcggtgtttgtggcggctgtttgatgcagcac
gtagaacctcatgcccaggtggcaattaagcaaagagccttagaggattgttttaagcat
attgccaagttggatattcctcagatattacctgcgctctatggaccgttttggcattat
cgctatcgcgcccgtctgtccgtgcgttacgtagcaaaaaaaggcgggatattgactgga
tttagagagcgtaagagtagctatgtagccgatatgacggagtgcttggtactgcctcaa
cggctgtctgatatgctgccggcgctccgtcaattgattgcgtccttcagtattaaagag
cggattccgcagatggaagtggctgtgggtgatgaggtgttagttttggtactacgccat
ctggagccctttgaagcggcggatattgccaagttgcatgcctttgcggcagagcacgac
gtgagttggtggcttcaacccaagggaccggatacggtacatccgctgctcgctgaggat
gagcaaaagctcgcatatcgtcttgatcagttcggcttgagaatggcttatcgaccgacc
gattttactcaggtgaatcactttattaatcgctccatgattgccaaagcattgaattta
ttggcggtggaagccggtgatagagtggcggatttattctgtggtttaggcaatttcagc
ttaccgcttgccacgcaggctaaggaggtggtgggcattgagggtagtgaggccttgacc
gaacgagcactggctgctgccgctcagcatggtttggcggataaaatgagtttttctacc
ttaaatctttttgaggtggatgtggaatggctgcgagcattgggttactttgatcgcatg
ttgattgatccgccacgtgatggtgctttagccgtagcgcgtgcgctagccgccttgaaa
gcgcacgagcgacctaaacgcattgtgtatgtttcctgtaatcccgccaccttagcacgt
gatgcagcgattttggttagagtcggtggctatcgcttaatcagtgctggagtgataaac
atgttcccgcacacggggcatgttgagtctattgcagtatttgaatatcacccgggtgat
cccataccagcgccggaggcggaagagggtgaagggcaggttgaggcattgctagcatag
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