Oligella urethralis: CEQ07_07010
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Entry
CEQ07_07010 CDS
T05343
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
our
Oligella urethralis
Pathway
our03030
DNA replication
our03410
Base excision repair
our03420
Nucleotide excision repair
our03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
our00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEQ07_07010
03410 Base excision repair
CEQ07_07010
03420 Nucleotide excision repair
CEQ07_07010
03440 Homologous recombination
CEQ07_07010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
our03032
]
CEQ07_07010
03400 DNA repair and recombination proteins [BR:
our03400
]
CEQ07_07010
Enzymes [BR:
our01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEQ07_07010
DNA replication proteins [BR:
our03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CEQ07_07010
DNA repair and recombination proteins [BR:
our03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CEQ07_07010
NER (nucleotide excision repair)
GGR (global genome repair) factors
CEQ07_07010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
DUF2802
Motif
Other DBs
NCBI-ProteinID:
AVL71186
LinkDB
All DBs
Position
complement(1475903..1478638)
Genome browser
AA seq
911 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFFAMPNLRNALGEPTGAIYGVMNMMRKINQDYNPDYMACVFDA
KGKTFRDDIYKEYKGNRPPMPDDLRSQIKPIHDAIRAMGWTVIAVEGVEADDVIATLAKK
ATDNGIESIISTSDKDMAQLVNEHVTLIDTMSNQVMDIEGVKARYGVKPEQIIDYLMLMG
DTSDNIPGVPKVGPKTAVKWLEEYGTLDSIIAHADNIKGVVGQNLREFIPTFEMTRRLVT
IKDDCDLPEAIDTPDDLRPLAQDKATLIDIFQKYGFRTWLRELTGDPEAIPAQDARVEAD
VVPAAPAVIDYQTVTTEAQLKDLRAVLQQAEIVALDTETDGLYSMAARLVGLSMSVKPGQ
AWYIPVGHQSSVLDEQQQQLSKAWVLEQLRPWLESEQAKKVLQNAKFDTHVLANEGVRLG
GIQHDTMLMGYVLDSSKRVGMEELMQRYLGRSGISYEQICGKGASAISFDQVAIEKAAEY
ACEDADVTLQLMQVMLPLIEAEPGFKRIYELEMQVSPVLTTIERNGVRVDEKSLNEQSRA
FAERLDELEQEAHAMVGEAFNLNSPRQLGEIFFEKMALPVIKKTPKGAPSTDEETLNRLA
EDYPLPKLILEYRSLAKLKSTYTDKLPAMIWPATGRVHTSYSQASVVTGRLSSSDPNLQN
IPVRSEEGRRIRRAFIAEPGKVIMAADYSQIELRVMAHISGDEGLRKAFAEGQDIHRSTA
AEIFSLASIDEVTADQRRSAKAINFGLIYGMGVFGLAKTLDISRDAAKLYIDRYFARYPG
VADYMERIKQEALEQGYVETVFGRRLWFKEIQGAKGPRRANAERQAINAPMQGTAADLIK
MAMVAVQKFIDEKKLKSLMIMQVHDELVLEVPEAEKDLMRQALPELMSGVAELSVPLIAE
VAVGENWRDAE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttattacttgttgatggctcaagctatttatatcgcgcattttttgcg
atgccgaacctacggaatgccctgggtgagcccaccggggcaatctacggcgtcatgaat
atgatgcgcaagataaatcaagattataatcctgattatatggcttgcgtcttcgatgct
aagggtaaaacctttagagatgatatctataaagagtataaaggtaatcggccacccatg
cccgatgatttacgttctcagataaaaccgattcacgatgccatccgtgccatgggttgg
acggtgattgcggtcgagggggttgaggccgacgatgtgattgctaccctggccaaaaaa
gccacggataacggcattgaatcgattatctccaccagtgataaggacatggcgcaacta
gtgaatgagcacgtcaccttaattgataccatgagtaatcaggtgatggatattgaggga
gtcaaggcgcgttatggtgtcaagccggagcagatcatcgactatttaatgttgatgggg
gacacctcagataatatccctggggtacctaaggtaggtcctaaaaccgctgttaaatgg
cttgaggaatacggtaccttggatagtatcatcgcacatgccgataacatcaagggggtg
gtaggccaaaatttgcgtgagtttattcccacctttgaaatgacgcgccgcttggtcacg
attaaagatgattgcgatttaccggaggccattgatacgccggacgatctccgtcccttg
gcgcaggacaaagccactttaattgatatttttcaaaaatacggtttccgcacctggtta
cgtgaattaactggtgatccagaagcgattccggcgcaggatgcgagggttgaggctgat
gtggtgcctgcagcaccagcagtgattgactatcaaaccgtcaccactgaagcacaacta
aaggatttgcgtgctgtgcttcagcaggctgagatagtggctttggacacggaaaccgat
ggtctttactcaatggctgcccgcttggttggcttgtccatgtcagttaagccgggtcag
gcctggtatattccggtcgggcatcaaagctcggtgttggacgagcaacagcagcaactg
agtaaagcatgggtgttagagcagctgcgcccttggctagaaagtgagcaagctaaaaag
gtgttgcaaaatgccaaatttgacacccatgtgttagcaaatgagggtgtacgattaggc
ggtattcagcatgacaccatgctgatgggctatgtgctggattcctcgaagcgagtcggc
atggaggagctgatgcagcgttacttagggcgcagtggcattagctatgagcagatttgt
ggcaagggcgcctcagccattagctttgatcaggtagcgatcgaaaaggccgccgaatac
gcctgtgaggatgcagatgtaaccttacagttaatgcaggtgatgctgcccttaattgag
gcggagccaggttttaagcgtatttatgagctggaaatgcaggtttccccggtgttgacc
acgattgagcgtaatggggttagggttgatgaaaaatccttaaatgaacaaagtcgtgcc
tttgctgagcgtcttgatgaattggaacaagaagcgcatgcgatggtgggggaagccttt
aatctgaattcaccacggcaactgggcgagattttcttcgagaaaatggctttgccagtc
attaaaaaaacacccaagggtgctccctcaaccgatgaggaaacgcttaaccgcttagcc
gaggactatcctctccctaaacttattcttgaatatcgtagccttgctaaattgaagtct
acttatactgataagctacccgccatgatttggccggcgaccggacgggtacatacgagt
tattcccaagcttccgtggtaacgggacgtctctcctcatcggatccaaatctgcaaaat
attccggtacgtagcgaggaagggcgtcgtattcgcagggcttttattgcagaaccgggc
aaggtgataatggcggcggattattcacaaatcgaattgcgcgtgatggcacatatttct
ggcgacgagggcttacgcaaagcctttgcggagggtcaagatattcaccgcagtacggca
gcggagattttctcgctagctagtatcgatgaggtgactgccgatcagcgtcgctcagct
aaagcaattaactttgggctgatatatggtatgggcgtatttggtttggctaaaacgttg
gatattagtcgagatgcagcgaagctttatattgatcgttattttgcgcgctatccaggc
gttgctgattatatggagcgcattaaacaagaagcgttggagcagggttatgtagaaacc
gtttttggtcgacgtctctggtttaaagaaattcagggcgccaagggaccccgtcgagcc
aatgctgagcgtcaagccattaatgcgccaatgcagggcacggcggccgatttaattaaa
atggcaatggttgccgtacaaaaatttattgatgagaaaaagcttaagagcttaatgatc
atgcaggtgcatgatgaacttgtcttggaagtacccgaagctgaaaaagacttaatgcgt
caagccttgcccgaattaatgagtggtgtggctgaactcagcgtacctttgatcgctgaa
gtggcggtgggtgaaaattggcgtgatgccgagtaa
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