Oligella urethralis: CEQ07_07145
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Entry
CEQ07_07145 CDS
T05343
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
our
Oligella urethralis
Pathway
our00541
Biosynthesis of various nucleotide sugars
our01100
Metabolic pathways
our01250
Biosynthesis of nucleotide sugars
Module
our_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
our00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CEQ07_07145 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
our01005
]
CEQ07_07145 (rfaD)
Enzymes [BR:
our01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CEQ07_07145 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
our01005
]
Core region
CEQ07_07145 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
Ldh_1_N
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AVL71210
UniProt:
A0A2N6QC30
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All DBs
Position
complement(1503415..1504407)
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AA seq
330 aa
AA seq
DB search
MIVVTGAAGFIGSQLLKGLNQQGLDDILAVDDLLQGDKFVNLRNHQIADYKDKDLFRQEL
LADQLPPISIVFHQGACSDTTERDGRYMMDNNYQVSLELLNYCQQRGIPFIYASSAATYG
AKQRFTEELASEGPLNVYGYSKFLFDQVVRRRLAERKAQIVGLRYFNVYGPNEQHKGRMA
SVAFHHFNQFMTEGRVRLFGEYDGYGPGEQVRDFIYVEDVVNVNLHFMQNPQISGIFNCG
TGQAQPFNDIAHTVINTVRQARGEAPLSLEEQIAQGLLQYIDFPEDLKGRYQSFTQANTD
KLRQVGAYQHRFKRVQEGVAEYVKHLLAQS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatagttgtaactggggccgctggctttattggtagtcaattgctaaaaggtttaaat
caacagggtttagatgatattttagcggttgatgatttattgcaaggcgataaatttgtg
aatttacgcaatcatcaaattgccgattataaggataaggatcttttccgccaggagctg
ctggctgatcagttgccccccatttctattgtctttcaccaaggggcttgctccgatacc
acagagcgcgatggtcgctatatgatggataataactaccaagtatcgttggagttatta
aattattgtcagcagcgaggtattcccttcatatatgcctcatcagccgctacctatggg
gccaaacagcgctttactgaagagttagcgtcagagggaccattaaatgtatatggctat
tctaaattcctcttcgatcaggtggtacgccgtcgtttggctgagcgtaaggcgcagatt
gttggtttgcgttactttaatgtctatggtcctaacgagcagcataaaggccgcatggcc
tcggttgcctttcatcattttaatcagtttatgactgaagggcgggtgcgcttatttggt
gaatatgatggttacggtcctggtgagcaagtgcgtgactttatttatgtagaagacgta
gtcaacgtcaatctgcattttatgcaaaacccgcaaatcagtggtatttttaattgcggt
actgggcaagcgcaaccatttaatgatattgctcatacggtgattaatacggtacgtcaa
gcgcgaggagaggcgccgcttagtttggaggagcagatcgctcaaggtcttctgcaatac
attgattttcccgaggatctaaaggggcgttaccaaagctttacgcaagcgaatactgat
aagcttagacaagtgggtgcctatcaacatcgctttaagcgggtacaagagggagtggcc
gagtacgtcaagcacttgctggcacagagctaa
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